RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 STXBP1P61764 594 aaKnown RBP27.75■■■□□ 2.03
CTDNEP1-208ENST00000573600 TICAM1Q8IUC6 712 aa27.75■■■□□ 2.03
CTDNEP1-208ENST00000573600 OR2L5Q8NG80 312 aa27.75■■■□□ 2.03
CTDNEP1-208ENST00000573600 POP5Q969H6 163 aaKnown RBP27.75■■■□□ 2.03
CTDNEP1-208ENST00000573600 KCNC2Q96PR1 638 aa27.75■■■□□ 2.03
CTDNEP1-208ENST00000573600 ERVK-11Q9UQG0 969 aa27.75■■■□□ 2.03
CTDNEP1-208ENST00000573600 KLK4Q9Y5K2 254 aa27.75■■■□□ 2.03
CTDNEP1-208ENST00000573600 TDRD6O60522 2096 aaKnown RBP27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 MDC1Q14676 2089 aaKnown RBP27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 A0A0A6YYD5 115 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 CAPNS1P04632 268 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 HOXB3P14651 431 aaPredicted RBP27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 ATP6V1C1P21283 382 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 RELAQ04206 551 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 TGM3Q08188 693 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 TOR1AIP1Q5JTV8 583 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 TRIM40Q6P9F5 258 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 KBTBD2Q8IY47 623 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 TRIML2Q8N7C3 387 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 FAM47BQ8NA70 645 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 C1orf216Q8TAB5 229 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 LRTOMTQ8WZ04 291 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 THAP11Q96EK4 314 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 NAF1Q96HR8 494 aaKnown RBP27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 C17orf62Q9BQA9 187 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 AICDAQ9GZX7 198 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 TPT1P8Q9HAU6 139 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 MUTYHQ9UIF7 546 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 EML5Q05BV3 1969 aa27.74■■■□□ 2.03
CTDNEP1-208ENST00000573600 C1orf226A1L170 272 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 CXCR6O00574 342 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 LRRC36Q1X8D7 754 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 ABHD17CQ6PCB6 329 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 SPESP1Q6UW49 350 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 GPR155Q7Z3F1 870 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 PAPD5Q8NDF8 572 aaKnown RBP27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 FIG4Q92562 907 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 PPWD1Q96BP3 646 aaKnown RBP27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 TEFMQ96QE5 360 aaKnown RBP27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 SPATA9Q9BWV2 254 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 SLC6A16Q9GZN6 736 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 KLHL31Q9H511 634 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 HRASLS2Q9NWW9 162 aa27.73■■■□□ 2.03
CTDNEP1-208ENST00000573600 B4DGG1 531 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 ERI3O43414 337 aaKnown RBP27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 TMPRSS11DO60235 418 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 FCGR1AP12314 374 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 EFNA1P20827 205 aaPredicted RBP27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 MAGP20916 626 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 BCKDHBP21953 392 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 NXPH1P58417 271 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 RGS1Q08116 209 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 GRAMD1BQ3KR37 738 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 ERICH5Q6P6B1 374 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 FIGLAQ6QHK4 219 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 ERMP1Q7Z2K6 904 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 OOSP2Q86WS3 158 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 SDR16C5Q8N3Y7 309 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 DNASE2BQ8WZ79 361 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 DUSP15Q9H1R2 295 aaPredicted RBP27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 DOLKQ9UPQ8 538 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 A0A1W2PRB8 838 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 DRD2P14416 443 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 MPEG1Q2M385 716 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 WDR45BQ5MNZ6 344 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 ASPGQ86U10 573 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 TRIM73Q86UV7 250 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 PDSS2Q86YH6 399 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 SFTPA2Q8IWL1 248 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 NT5CQ8TCD5 201 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 LMX1AQ8TE12 382 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 ZFP90Q8TF47 636 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 CIDECQ96AQ7 238 aaPredicted RBP27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 DTNAQ9Y4J8 743 aa27.72■■■□□ 2.03
CTDNEP1-208ENST00000573600 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 GUCY1B2O75343 617 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 TIPRLO75663 272 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 C6orf47O95873 294 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 HNRNPKP61978 463 aaKnown RBP eCLIP27.71■■■□□ 2.033e-48■■■■■ 50.4
CTDNEP1-208ENST00000573600 HBA1P69905 142 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 SLC14A1Q13336 389 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 SLC9A5Q14940 896 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 CPZQ66K79 652 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 FBXO42Q6P3S6 717 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 TMEFF1Q8IYR6 380 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 ZCCHC7Q8N3Z6 543 aaKnown RBP27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 FAM162AQ96A26 154 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 FAIM2Q9BWQ8 316 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 PRDM7Q9NQW5 492 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 TAS2R9Q9NYW1 312 aa27.71■■■□□ 2.03
CTDNEP1-208ENST00000573600 A0A0J9YY10 115 aa27.7■■■□□ 2.03
CTDNEP1-208ENST00000573600 RETP07949 1114 aa27.7■■■□□ 2.03
CTDNEP1-208ENST00000573600 HIST1H1TP22492 207 aaPredicted RBP27.7■■■□□ 2.03
CTDNEP1-208ENST00000573600 FCRL6Q6DN72 434 aa27.7■■■□□ 2.03
CTDNEP1-208ENST00000573600 ZNF793Q6ZN11 406 aa27.7■■■□□ 2.03
CTDNEP1-208ENST00000573600 VN1R4Q7Z5H5 301 aa27.7■■■□□ 2.03
CTDNEP1-208ENST00000573600 C10orf111Q8N326 155 aa27.7■■■□□ 2.03
CTDNEP1-208ENST00000573600 OR5K3A6NET4 321 aa27.7■■■□□ 2.02
CTDNEP1-208ENST00000573600 VILLO15195 856 aa27.7■■■□□ 2.02
CTDNEP1-208ENST00000573600 ABCB1P08183 1280 aaPredicted RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms