RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PKP2Q99959 881 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 FUT8Q9BYC5 575 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 ZWILCHQ9H900 591 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 COG4Q9H9E3 785 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 CHODLQ9H9P2 273 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 MKKSQ9NPJ1 570 aaPredicted RBP6.41□□□□□ -1.38
CHD3-213ENST00000571249 C19orf25Q9UFG5 118 aaPredicted RBP6.41□□□□□ -1.38
CHD3-213ENST00000571249 LCMT1Q9UIC8 334 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 CDC14AQ9UNH5 594 aa6.41□□□□□ -1.38
CHD3-213ENST00000571249 TENM2Q9NT68 2774 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 LOC105369274A0A096LPK9 316 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 LOC102723532A0A0G2JNH3 316 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 GLYATL1P3A0A0U1RQE8 302 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 TCRBV5S1A1TA0A578 114 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 TMEM89A2RUT3 159 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 TMCO5BA8MYB1 307 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 EEF1E1-BLOC1S5C9J1V9 151 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 PGRMC1O00264 195 aaKnown RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 PRPF4O43172 522 aaKnown RBP eCLIP6.4□□□□□ -1.38
CHD3-213ENST00000571249 PRODHO43272 600 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 EEF1E1O43324 174 aaKnown RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 CTSVO60911 334 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 SNUPNO95149 360 aaKnown RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 CALB1P05937 261 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 ANXA5P08758 320 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 RHOXF2BP0C7M4 288 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 GABRA1P14867 456 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 CXCR5P32302 372 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 TRHRP34981 398 aaPredicted RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 IDUAP35475 653 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 ARL4AP40617 200 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 SLC26A3P40879 764 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 SLC1A1P43005 524 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 HTR3AP46098 478 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 NSFP46459 744 aaKnown RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 ZNF136P52737 540 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 ZNF135P52742 658 aaPredicted RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 GSCP56915 257 aaPredicted RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 MAT1AQ00266 395 aaKnown RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 C2orf54Q08AI8 447 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 SQLEQ14534 574 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 MFSD4BQ5TF39 518 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 DCUN1D2Q6PH85 259 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 ABHD13Q7L211 337 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 MAATS1Q7Z4T9 603 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 MDGA2Q7Z553 956 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 ANKRD37Q7Z713 158 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 OR4N4Q8N0Y3 316 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 C2orf73Q8N5S3 287 aaPredicted RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 RFLNBQ8N5W9 214 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 LMNTD1Q8N9Z9 388 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 DTX3LQ8TDB6 740 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 AENQ8WTP8 325 aaKnown RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 MMABQ96EY8 250 aaPredicted RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 MS4A14Q96JA4 679 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 RHOXF2Q9BQY4 288 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 VN1R1Q9GZP7 353 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 ASB8Q9H765 288 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 ZDHHC11Q9H8X9 412 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 VIPAS39Q9H9C1 493 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 HAUS2Q9NVX0 235 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.4□□□□□ -1.38
CHD3-213ENST00000571249 CTTNBP2NLQ9P2B4 639 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 ZNF629Q9UEG4 869 aaPredicted RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 AMACRQ9UHK6 382 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 PACSIN2Q9UNF0 486 aaPredicted RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 ASF1AQ9Y294 204 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 WBP11Q9Y2W2 641 aaKnown RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 DYRK1BQ9Y463 629 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 TNPO3Q9Y5L0 923 aaKnown RBP6.4□□□□□ -1.38
CHD3-213ENST00000571249 CORINQ9Y5Q5 1042 aa6.4□□□□□ -1.38
CHD3-213ENST00000571249 IGHV4-30-2A0A087WSY4 118 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 A0A0J9YVX5 310 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 A0A1B0GVC2 190 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 OR2W5A6NFC9 320 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 C2orf81A6NN90 581 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 J3QW42 95 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 ACOT7O00154 380 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 AQP7O14520 342 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 BUD23O43709 281 aaKnown RBP6.39□□□□□ -1.39
CHD3-213ENST00000571249 NDUFS7O75251 213 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 IGHG3P01860 377 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 GSTP1P09211 210 aaKnown RBP6.39□□□□□ -1.39
CHD3-213ENST00000571249 BMP2P12643 396 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 COMTP21964 271 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 PSMA2P25787 234 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 MIPP30301 263 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 CEACAM8P31997 349 aaPredicted RBP6.39□□□□□ -1.39
CHD3-213ENST00000571249 CTNNA1P35221 906 aaKnown RBP6.39□□□□□ -1.39
CHD3-213ENST00000571249 SERPINB6P35237 376 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 HMGCLP35914 325 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 MAN2A2P49641 1150 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 MLF1P58340 268 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 ITGA9Q13797 1035 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 PCSK7Q16549 785 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 TMEM201Q5SNT2 666 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 FAM182AQ5T1J6 154 aa6.39□□□□□ -1.39
CHD3-213ENST00000571249 ZDHHC20Q5W0Z9 365 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms