RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 PHKG1Q16816 387 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 RGS9BPQ6ZS82 235 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 MDGA2Q7Z553 956 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 GPALPP1Q8IXQ4 340 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 MCUQ8NE86 351 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 OR5M3Q8NGP4 307 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 OR56A3Q8NH54 315 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 GABPB2Q8TAK5 448 aaPredicted RBP17.7■□□□□ 0.42
SCARF1-204ENST00000570902 ATL1Q8WXF7 558 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 NINJ1Q92982 152 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 PYCR2Q96C36 320 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 VMP1Q96GC9 406 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 SERPINB12Q96P63 405 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 FOXC2Q99958 501 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 CCDC77Q9BR77 488 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 TRIM54Q9BYV2 358 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 NECTIN3Q9NQS3 549 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 ZFATQ9P243 1243 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 ERVK-11Q9UQG0 969 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 MMACHCQ9Y4U1 282 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 KLK8O60259 260 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 MYO1DO94832 1006 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 SSR4P51571 173 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 IST1P53990 364 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 RAB8AP61006 207 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 HSP90AA5PQ58FG0 334 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 EMC4Q5J8M3 183 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 PAQR3Q6TCH7 311 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 RPRMLQ8N4K4 120 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 TRPV3Q8NET8 790 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 CREB3L4Q8TEY5 395 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 SLC5A11Q8WWX8 675 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 LINGO1Q96FE5 620 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 OR4K3Q96R72 315 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 NDNQ99608 321 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 SLC6A16Q9GZN6 736 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 DEFB127Q9H1M4 99 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 CXXC4Q9H2H0 198 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 RHBGQ9H310 441 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 PPIEQ9UNP9 301 aaKnown RBP17.69■□□□□ 0.42
SCARF1-204ENST00000570902 YARS2Q9Y2Z4 477 aaKnown RBP17.69■□□□□ 0.42
SCARF1-204ENST00000570902 MAD1L1Q9Y6D9 718 aa17.69■□□□□ 0.42
SCARF1-204ENST00000570902 SPG11Q96JI7 2443 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 KRT14P02533 472 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 HNF4AP41235 474 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 PPIAP62937 165 aaKnown RBP17.68■□□□□ 0.42
SCARF1-204ENST00000570902 TIAL1Q01085 375 aaKnown RBP eCLIP17.68■□□□□ 0.42
SCARF1-204ENST00000570902 PLGLB1Q02325 96 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 HYAL2Q12891 473 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 KCTD19Q17RG1 926 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-204ENST00000570902 CATSPEREQ5SY80 951 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 GPATCH11Q8N954 259 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.68■□□□□ 0.42
SCARF1-204ENST00000570902 PSD4Q8NDX1 1056 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 NEIL2Q969S2 332 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 PDLIM2Q96JY6 352 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 IARS2Q9NSE4 1012 aaKnown RBP17.68■□□□□ 0.42
SCARF1-204ENST00000570902 KCMF1Q9P0J7 381 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 JRKLQ9Y4A0 524 aa17.68■□□□□ 0.42
SCARF1-204ENST00000570902 INTS1Q8N201 2190 aaKnown RBP17.67■□□□□ 0.42
SCARF1-204ENST00000570902 OR14I1A6ND48 311 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 FIGNL2A6NMB9 653 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 A8MVJ9 347 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 NPIPA2E9PIF3 369 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 NPIPA3F8WFD2 350 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 GOLGA8MH3BSY2 632 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 BCKDKO14874 412 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 ZFAND5O76080 213 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 ACVR2AP27037 513 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 IL2P60568 153 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 PPP2R2AP63151 447 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 BBS9Q3SYG4 887 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 GXYLT1Q4G148 440 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 HECTD2Q5U5R9 776 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 SLC22A16Q86VW1 577 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 TGIF2LYQ8IUE0 185 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 CA13Q8N1Q1 262 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 C2CD4AQ8NCU7 369 aaPredicted RBP17.67■□□□□ 0.42
SCARF1-204ENST00000570902 OR10Q1Q8NGQ4 319 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 FBXL8Q96CD0 374 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 AIF1LQ9BQI0 150 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 ZDHHC11Q9H8X9 412 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 HPF1Q9NWY4 346 aa17.67■□□□□ 0.42
SCARF1-204ENST00000570902 TRMT1Q9NXH9 659 aaKnown RBP17.67■□□□□ 0.42
SCARF1-204ENST00000570902 SYNDIG1LA6NDD5 238 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 ZSCAN12O43309 604 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 SMIM10L1P0DMW3 83 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 MAGEA3P43357 314 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 REEP5Q00765 189 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 NDUFAF5Q5TEU4 345 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 SLC35F6Q8N357 371 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 OR2M7Q8NG81 312 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 ASB15Q8WXK1 588 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 NRGNQ92686 78 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 NCLNQ969V3 563 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 SMIM10Q96HG1 83 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 MS4A14Q96JA4 679 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 TSNARE1Q96NA8 513 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 SPNS1Q9H2V7 528 aa17.66■□□□□ 0.42
SCARF1-204ENST00000570902 PELI2Q9HAT8 420 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms