RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SLC26A11Q86WA9 606 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 MFSD6LQ8IWD5 586 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 NDUFAF2Q8N183 169 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 PCDH20Q8N6Y1 951 aaKnown RBP6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ARL10Q8N8L6 244 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 IPMKQ8NFU5 416 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 OR52N4Q8NGI2 321 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 OR52K1Q8NGK4 314 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 FAM76AQ8TAV0 307 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ITFG1Q8TB96 612 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ARRDC2Q8TBH0 407 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 SLC25A43Q8WUT9 341 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ING5Q8WYH8 240 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TMCO6Q96DC7 493 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ALG14Q96F25 216 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 SIPA1Q96FS4 1042 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TMEM68Q96MH6 324 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 BBS4Q96RK4 519 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 FICDQ9BVA6 458 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 KIFC1Q9BW19 673 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TDRD1Q9BXT4 1180 aaKnown RBP6.87□□□□□ -1.31
CNOT1-222ENST00000570139 HRH4Q9H3N8 390 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 CENPHQ9H3R5 247 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TRABDQ9H4I3 376 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ATP13A3Q9H7F0 1226 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 ZFP14Q9HCL3 533 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 DNAJC17Q9NVM6 304 aaKnown RBP6.87□□□□□ -1.31
CNOT1-222ENST00000570139 VPS18Q9P253 973 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TXNDC16Q9P2K2 825 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 NLKQ9UBE8 527 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 PADI1Q9ULC6 663 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 FAM96BQ9Y3D0 163 aa6.87□□□□□ -1.31
CNOT1-222ENST00000570139 TCRBV21S2A2A0A5A6 115 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 FAM90A8PA6NJQ4 464 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 FAM159BA6NKW6 160 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 A6NL46 340 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 HEPACAM2A8MVW5 462 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 H3BQF6 201 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 MITFO75030 526 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 AVILO75366 819 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 DDAH2O95865 285 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 MT-CYBP00156 380 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 MMP2P08253 660 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 INHBAP08476 426 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 FAM90A13PP0C7W8 464 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 FAM90A24PP0C7X0 464 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 PCNAP12004 261 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 PSMC3P17980 439 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 POLR2EP19388 210 aaKnown RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 NR1D1P20393 614 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 SSTR1P30872 391 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 SLC18A1P54219 525 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 ECT2LQ008S8 904 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 RUNX2Q13950 521 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 CYTH1Q15438 398 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 SHBQ15464 509 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 ALG11Q2TAA5 492 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 FBLN7Q53RD9 439 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 TTMPQ5BVD1 217 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 TNFAIP8L3Q5GJ75 292 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 LY6G5CQ5SRR4 150 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 CST9LP1Q5W188 147 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 DHRS13Q6UX07 377 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 KDM7AQ6ZMT4 941 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 MARK2Q7KZI7 788 aaKnown RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 BCDIN3DQ7Z5W3 292 aaKnown RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 TMEM25Q86YD3 366 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 PGBD5Q8N414 524 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 PAQR4Q8N4S7 273 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 TMCO5AQ8N6Q1 288 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 Q8NFD4 153 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 OR2AP1Q8NGE2 309 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 OR52K2Q8NGK3 314 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 SPATA22Q8NHS9 363 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 SLC44A1Q8WWI5 657 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 TLCD1Q96CP7 247 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 ELMOD3Q96FG2 381 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 CERS2Q96G23 380 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 CFAP36Q96G28 342 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 ZNF419Q96HQ0 510 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 LMLNQ96KR4 655 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 ZNF347Q96SE7 839 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 PAFAH2Q99487 392 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 SRSF8Q9BRL6 282 aaKnown RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 WDR83Q9BRX9 315 aaKnown RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 PLK3Q9H4B4 646 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 RANGRFQ9HD47 186 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 ARL8BQ9NVJ2 186 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 SYBUQ9NX95 663 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 EURLQ9NYK6 297 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 WSB2Q9NYS7 404 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-222ENST00000570139 EPS15L1Q9UBC2 864 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 LHX3Q9UBR4 397 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 CARD8Q9Y2G2 431 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 TCAF1Q9Y4C2 921 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 MTCH2Q9Y6C9 303 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 NUP205Q92621 2012 aa6.86□□□□□ -1.31
CNOT1-222ENST00000570139 LAMA2P24043 3122 aaKnown RBP6.85□□□□□ -1.31
CNOT1-222ENST00000570139 COL4A3Q01955 1670 aa6.85□□□□□ -1.31
CNOT1-222ENST00000570139 LRRC72A6NJI9 287 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms