RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CDCP1Q9H5V8 836 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 GRHL1Q9NZI5 618 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 COPG2Q9UBF2 871 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 TINAGQ9UJW2 476 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 ENTPD4Q9Y227 616 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 DYRK1BQ9Y463 629 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 PCDHGB6Q9Y5F9 930 aa12.96□□□□□ -0.33
GTF3C1-211ENST00000569653 DNAJC13O75165 2243 aa12.96□□□□□ -0.34
GTF3C1-211ENST00000569653 SAGE2PA6NJ88 616 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 PRSS44E7EML9 344 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 KIF2AO00139 706 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 CCL21O00585 134 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 PHGDHO43175 533 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 URI1O94763 535 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 WDR47O94967 919 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 TUBB4AP04350 444 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 SERPINA6P08185 405 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 KCNC1P48547 511 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 NR0B1P51843 470 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 MLF1P58340 268 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 HSF1Q00613 529 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 WHAMMP3Q1A5X7 153 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 SP5Q6BEB4 398 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 ABHD13Q7L211 337 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 RPS19BP1Q86WX3 136 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 SCUBE1Q8IWY4 988 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 ZBED8Q8IZ13 594 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 NKAPQ8N5F7 415 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 APCDD1LQ8NCL9 501 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 SUN3Q8TAQ9 357 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 GPR137Q96N19 417 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 CSF3RQ99062 836 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 AIF1LQ9BQI0 150 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 ZNF835Q9Y2P0 537 aa12.95□□□□□ -0.34
GTF3C1-211ENST00000569653 NCF1BA6NI72 391 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 NCF1CA8MVU1 366 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 NPIPA5E9PKD4 350 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 EIF3HO15372 352 aaKnown RBP eCLIP12.94□□□□□ -0.344e-7■■■■□ 20.2
GTF3C1-211ENST00000569653 PRKNO60260 465 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 PRMT3O60678 531 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 SLC19A2O60779 497 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 SP1P08047 785 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 C1GALT1C1LP0DN25 315 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 RNH1P13489 461 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 NCF1P14598 390 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 GPR143P51810 404 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 GPX6P59796 221 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 CAV1Q03135 178 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 SLBPQ14493 270 aaKnown RBP eCLIP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 TRADDQ15628 312 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 C8orf74Q6P047 294 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 C16orf47Q6ZP98 133 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 MRGPRGQ86SM5 289 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 ADAMTSL2Q86TH1 951 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 SRRM1Q8IYB3 904 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 LGI4Q8N135 537 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 ARMC10Q8N2F6 343 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 CPSF7Q8N684 471 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 SLC5A8Q8N695 610 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 ADAMTS18Q8TE60 1221 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 MS4A6EQ96DS6 147 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 EGFL8Q99944 293 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 PHACTR1Q9C0D0 580 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 DERL2Q9GZP9 239 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 TRIM45Q9H8W5 580 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 GPAMQ9HCL2 828 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 PRDM9Q9NQV7 894 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 LRFN1Q9P244 771 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 CTNNAL1Q9UBT7 734 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 ZNF490Q9ULM2 529 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 NPIPA1Q9UND3 350 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 KCNE2Q9Y6J6 123 aa12.94□□□□□ -0.34
GTF3C1-211ENST00000569653 MYOCOSA0A1B0GUC4 107 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 TCRBV9S1A1TA0A576 114 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 LRIT2A6NDA9 550 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 TMEM200CA6NKL6 621 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 C19orf84I3L1E1 186 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 NME2P1O60361 137 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 SLC25A12O75746 678 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 FAM155BO75949 473 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 CD1DP15813 335 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 NME2P22392 152 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 JAK1P23458 1154 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 TNFRSF8P28908 595 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 EEF1DP29692 281 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 BTN3A2P78410 334 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 OC90Q02509 493 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 DLG1Q12959 904 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 ART3Q13508 389 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 TGFBIQ15582 683 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 ADPRMQ3LIE5 342 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 SLC25A25Q6KCM7 469 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 Q6ZPB1 254 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 UBE3DQ7Z6J8 389 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 TRPV3Q8NET8 790 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 THAP3Q8WTV1 239 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 PYROXD1Q8WU10 500 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 GAL3ST3Q96A11 431 aa12.93□□□□□ -0.34
GTF3C1-211ENST00000569653 POPDC3Q9HBV1 291 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms