RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 NSA2O95478 260 aaKnown RBP13.7□□□□□ -0.22
COMMD4-225ENST00000569245 IL1RNP18510 177 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 EEF1DP29692 281 aaKnown RBP13.7□□□□□ -0.22
COMMD4-225ENST00000569245 GDF5P43026 501 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 SLC6A12P48065 614 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 SLC1A6P48664 564 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 AGTR2P50052 363 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 MLLT10P55197 1068 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 ABCE1P61221 599 aaKnown RBP13.7□□□□□ -0.22
COMMD4-225ENST00000569245 OCRLQ01968 901 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 GALNT1Q10472 559 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-225ENST00000569245 RCN2Q14257 317 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 RBBP5Q15291 538 aaKnown RBP13.7□□□□□ -0.22
COMMD4-225ENST00000569245 IGFBP7Q16270 282 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 C18orf21Q32NC0 220 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-225ENST00000569245 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 NXPE4Q6UWF7 544 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 TMPRSS11BQ86T26 416 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 HPS6Q86YV9 775 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 PARP9Q8IXQ6 854 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 CCNYL1Q8N7R7 359 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 ZNF740Q8NDX6 193 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 OR11G2Q8NGC1 345 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 ZNF483Q8TF39 744 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-225ENST00000569245 TM4SF19Q96DZ7 209 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 CHMP6Q96FZ7 201 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 C7orf26Q96N11 449 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 SMAD5Q99717 465 aaKnown RBP13.7□□□□□ -0.22
COMMD4-225ENST00000569245 AIF1LQ9BQI0 150 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 TRMOQ9BU70 441 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 CD244Q9BZW8 370 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 GSTO2Q9H4Y5 243 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 CLMPQ9H6B4 373 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 PELI2Q9HAT8 420 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 ZNF160Q9HCG1 818 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 WWOXQ9NZC7 414 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 HCN3Q9P1Z3 774 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 PCTPQ9UKL6 214 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 MKL2Q9ULH7 1088 aa13.7□□□□□ -0.22
COMMD4-225ENST00000569245 PCM1Q15154 2024 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 GMNCA6NCL1 334 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 E2F3O00716 465 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 STK16O75716 305 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 SUPT7LO94864 414 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 GNAZP19086 355 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 RGS1Q08116 209 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 PWP1Q13610 501 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 MINDY4Q4G0A6 757 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 FRMD7Q6ZUT3 714 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 PRSS41Q7RTY9 318 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 OR51Q1Q8NH59 317 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 METTL21AQ8WXB1 218 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 TM9SF4Q92544 642 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 MOCOSQ96EN8 888 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 MESP1Q9BRJ9 268 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 TGIF2Q9GZN2 237 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 C20orf27Q9GZN8 174 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 SLAMF7Q9NQ25 335 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 PSD3Q9NYI0 1048 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 LUZP4Q9P127 313 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 C5AR2Q9P296 337 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 ZFP69BQ9UJL9 534 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 NAALAD2Q9Y3Q0 740 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 ASB1Q9Y576 335 aa13.69□□□□□ -0.22
COMMD4-225ENST00000569245 FER1L5A0AVI2 2057 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 NSG1A0A0A6YYJ2 146 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 LRRC14BA6NHZ5 514 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 K7EPI3 171 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 ITM2AO43736 263 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 EDF1O60869 148 aaKnown RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 KLHL18O94889 574 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 BMP10O95393 424 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 HPP00738 406 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 VARSP26640 1264 aaKnown RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 ARRB2P32121 409 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 HNF4AP41235 474 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 XCR1P46094 333 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 SCTRP47872 440 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 PIK3CGP48736 1102 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 HSPA7P48741 367 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 SOX8P57073 446 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 SNRPNP63162 240 aaKnown RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 CBX1P83916 185 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 CLCQ05315 142 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 EEF1A2Q05639 463 aaKnown RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 HERC3Q15034 1050 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 ARL13AQ5H913 290 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 AGAP7PQ5VUJ5 663 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 ATG9BQ674R7 924 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 JMJD6Q6NYC1 403 aaPredicted RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 NDUFAF7Q7L592 441 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 LRRC70Q7Z2Q7 622 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 ZC3H7AQ8IWR0 971 aaKnown RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 LRRC34Q8IZ02 419 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 EFCAB3Q8N7B9 438 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 SNX31Q8N9S9 440 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 PPP4R1Q8TF05 950 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 ESAMQ96AP7 390 aa13.68□□□□□ -0.22
COMMD4-225ENST00000569245 THOC3Q96J01 351 aaKnown RBP13.68□□□□□ -0.22
COMMD4-225ENST00000569245 AGAP4Q96P64 663 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms