RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TRIP11Q15643 1979 aa3.14□□□□□ -1.91
HMGB1P6-201ENST00000569046 BAHCC1Q9P281 2608 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 A0A087WV48 116 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 A0A1W2PP11 408 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 CTAGE9A4FU28 777 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 RGSL1A5PLK6 1076 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM90A26D6RGX4 464 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM86B1E9PN63 330 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 K7EPI3 171 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 SLC33A1O00400 549 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 MEIS2O14770 477 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 NDC80O14777 642 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 GPC4O75487 556 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 RSL1D1O76021 490 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 DDHD2O94830 711 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM86B2P0C5J1 330 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 CTAGE8P0CG41 777 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 UROSP10746 265 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 PRLRP16471 622 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ADRA2CP18825 462 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 CYP11B2P19099 503 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 TYMPP19971 482 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 NR1D1P20393 614 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 MX1P20591 662 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 TCEA1P23193 301 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 RABIFP47224 123 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 FASLGP48023 281 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 SLC11A1P49279 550 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 CLCN4P51793 760 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 NME5P56597 212 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ASIC1P78348 528 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 HTD2P86397 168 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 RBPJQ06330 500 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 SPOCK1Q08629 439 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ACSM1Q08AH1 577 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZNF234Q14588 700 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 SF3A2Q15428 464 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 DCST1Q5T197 706 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 DHRS7BQ6IAN0 325 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 LCN10Q6JVE6 187 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 CWC27Q6UX04 472 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 NHLRC1Q6VVB1 395 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 C15orf39Q6ZRI6 1047 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 HAUS6Q7Z4H7 955 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ECHDC2Q86YB7 292 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ARID3BQ8IVW6 561 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 CTAGE4Q8IX94 777 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ANKRD20A12PQ8NF67 263 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 SLC24A4Q8NFF2 622 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 OCC1Q8TAD7 63 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ST7LQ8TDW4 575 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 SLC38A5Q8WUX1 472 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 FGF14Q92915 247 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 EGLN2Q96KS0 407 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 QRFPRQ96P65 431 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 KATNB1Q9BVA0 655 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 TRMT61BQ9BVS5 477 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 PLA2G2FQ9BZM2 168 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 RTN4RQ9BZR6 473 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 TMEM117Q9H0C3 514 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZBP1Q9H171 429 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 MMP27Q9H306 513 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 TSPY26PQ9H489 355 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 AZI2Q9H6S1 392 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 CWC15Q9P013 229 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ACTR3BQ9P1U1 418 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 CGNQ9P2M7 1197 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 COPG2Q9UBF2 871 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 OR14J1Q9UGF5 321 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 IL19Q9UHD0 177 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 DDX25Q9UHL0 483 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 HOOK1Q9UJC3 728 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 FBXL2Q9UKC9 423 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 NDRG2Q9UN36 371 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 PIN4Q9Y237 131 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ARID2Q68CP9 1835 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 ANK1P16157 1881 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 TTC41PQ6P2S7 1318 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 MAP1BP46821 2468 aaKnown RBP3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 COL4A2P08572 1712 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 VWA8A3KMH1 1905 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 CEP192Q8TEP8 1941 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 NBEAQ8NFP9 2946 aa3.13□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM186AA6NE01 2351 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 CFAP47Q6ZTR5 3102 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 MYO16Q9Y6X6 1858 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 PTPRZ1P23471 2315 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 KANSL1LA0AUZ9 987 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 TMEM150BA6NC51 233 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 OOEPA6NGQ2 149 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 CYSRT1A8MQ03 144 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 IFIT3O14879 490 aaKnown RBP3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 ANKRD28O15084 1053 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 ST8SIA3O43173 380 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 SMPD2O60906 423 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 WDR1O75083 606 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 JRKO75564 520 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 CREG1O75629 220 aa3.12□□□□□ -1.91
HMGB1P6-201ENST00000569046 PLEKHA8P1O95397 391 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms