RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SLC13A5Q86YT5 568 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 LIX1LQ8IVB5 337 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 SPNS2Q8IVW8 549 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 TBC1D19Q8N5T2 526 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 RNF214Q8ND24 703 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 ACRBPQ8NEB7 543 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 ABHD11Q8NFV4 315 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 OR2M7Q8NG81 312 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 VMP1Q96GC9 406 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 GPR21Q99679 349 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 TTTY12Q9BZ98 90 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 ATG10Q9H0Y0 220 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 NECTIN3Q9NQS3 549 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 CRIM1Q9NZV1 1036 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 Q9UFV3 132 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 YARS2Q9Y2Z4 477 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 COMMD10Q9Y6G5 202 aa10.98□□□□□ -0.65
GTF3C1-209ENST00000568569 A0A1B0GVC2 190 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 TRBC2A0A5B9 178 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 PINLYPA6NC86 204 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 A6NNC1 897 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 AQP7O14520 342 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 SLC16A5O15375 505 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 WDR1O75083 606 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 IGHG3P01860 377 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 C8GP07360 202 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 NPPBP16860 134 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 HYAL2Q12891 473 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 SP140Q13342 867 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 THOC5Q13769 683 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 RTL6Q6ICC9 239 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 CASC4Q6P4E1 433 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 ZNF549Q6P9A3 640 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 PAMR1Q6UXH9 720 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 RAD9BQ6WBX8 426 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 TRILQ7L0X0 811 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 CDC20BQ86Y33 519 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 DENND6AQ8IWF6 608 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 FAM109AQ8N4B1 249 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 OR4K1Q8NGD4 311 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 NT5CQ8TCD5 201 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 UTP15Q8TED0 518 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 ASB15Q8WXK1 588 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 CCDC77Q9BR77 488 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 PARVBQ9HBI1 364 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 FBXO6Q9NRD1 293 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 SAMD15Q9P1V8 674 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 ZFATQ9P243 1243 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 B4GALT7Q9UBV7 327 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 ZFP69BQ9UJL9 534 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 ZNF223Q9UK11 482 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 PPIEQ9UNP9 301 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 PDE10AQ9Y233 779 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 MMACHCQ9Y4U1 282 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 LIPGQ9Y5X9 500 aa10.97□□□□□ -0.65
GTF3C1-209ENST00000568569 PHF3Q92576 2039 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 A0A0G2JMM0 328 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 A0A1W2PPB8 328 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 A0A1W2PRS3 328 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 URADA6NGE7 173 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 KIR3DP1A8MWS1 328 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 AVILO75366 819 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 OR2J2O76002 312 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 ZFAND5O76080 213 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 GLSO94925 669 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 RAF1P04049 648 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 F7P08709 466 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 TPSB2P20231 275 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 ADSLP30566 484 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 AHRP35869 848 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 ADH7P40394 386 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 KIF5AQ12840 1032 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 CTBP1Q13363 440 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 SNTB1Q13884 538 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 DHX34Q14147 1143 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 TPSAB1Q15661 275 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 DEFB113Q30KQ7 82 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 FLYWCH1Q4VC44 716 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 C1orf185Q5T7R7 199 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 WLSQ5T9L3 541 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 HECTD2Q5U5R9 776 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 PALM2Q8IXS6 379 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 WFDC11Q8NEX6 87 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 NCLNQ969V3 563 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 PDLIM2Q96JY6 352 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 C18orf12Q96KH6 178 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 TRIM5Q9C035 493 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 RHBGQ9H310 441 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 TSPY26PQ9H489 355 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 DMRT3Q9NQL9 472 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 PNO1Q9NRX1 252 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 TRMT6Q9UJA5 497 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 ADAMTS6Q9UKP5 1117 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 ACAD8Q9UKU7 415 aa10.96□□□□□ -0.65
GTF3C1-209ENST00000568569 FN1P02751 2386 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 SUSD5O60279 629 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 OR6B1O95007 311 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 HIST1H2AGP0C0S8 130 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 GABRA1P14867 456 aa10.95□□□□□ -0.66
GTF3C1-209ENST00000568569 HIST1H2ADP20671 130 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms