RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 LANCL2Q9NS86 450 aa17.63■□□□□ 0.41
CMTM3-210ENST00000565666 TMEM216Q9P0N5 145 aa17.63■□□□□ 0.41
CMTM3-210ENST00000565666 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.63■□□□□ 0.41
CMTM3-210ENST00000565666 ADGRE2Q9UHX3 823 aa17.63■□□□□ 0.41
CMTM3-210ENST00000565666 PCDHGA11Q9Y5H2 935 aa17.63■□□□□ 0.41
CMTM3-210ENST00000565666 V9GYY5 206 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-210ENST00000565666 IGHV3-20A0A0C4DH32 117 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 J3QKU1 62 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 UGDHO60701 494 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 SH3BGRLO75368 114 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 SEC24DO94855 1032 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-210ENST00000565666 TGFB1P01137 390 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 PYGBP11216 843 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 KRT15P19012 456 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 CCNG1P51959 295 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 MTTPP55157 894 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 RHAGQ02094 409 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 ACTN3Q08043 901 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-210ENST00000565666 ABRAXAS2Q15018 415 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 ABHD17CQ6PCB6 329 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 CHSY3Q70JA7 882 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 ANKRD37Q7Z713 158 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 PLPP5Q8NEB5 264 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 SRFBP1Q8NEF9 429 aaKnown RBP17.62■□□□□ 0.41
CMTM3-210ENST00000565666 REPS1Q96D71 796 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 CMTM7Q96FZ5 175 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 PTCHD1Q96NR3 888 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 QRFPRQ96P65 431 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 SERINC2Q96SA4 455 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 NPLQ9BXD5 320 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-210ENST00000565666 EPN3Q9H201 632 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 NOL11Q9H8H0 719 aaKnown RBP17.62■□□□□ 0.41
CMTM3-210ENST00000565666 PCTPQ9UKL6 214 aa17.62■□□□□ 0.41
CMTM3-210ENST00000565666 SCN2AQ99250 2005 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 A8MT66 165 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 MAGEB17A8MXT2 336 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 PRMT3O60678 531 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 CLDN9O95484 217 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 TBX6O95947 436 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-210ENST00000565666 SERPINA7P05543 415 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 PRR35P0CG20 571 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 ICAM2P13598 275 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 CERS1P27544 350 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 HSD17B3P37058 310 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 AP2B1P63010 937 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 TLE1Q04724 770 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 CPSF6Q16630 551 aaKnown RBP eCLIP17.61■□□□□ 0.41
CMTM3-210ENST00000565666 ZADH2Q8N4Q0 377 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 EPS8L3Q8TE67 593 aaKnown RBP17.61■□□□□ 0.41
CMTM3-210ENST00000565666 MZB1Q8WU39 189 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 TSLPQ969D9 159 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 KCNC2Q96PR1 638 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 ROGDIQ9GZN7 287 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 EPS8L2Q9H6S3 715 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 SEMA4BQ9NPR2 832 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-210ENST00000565666 RNF11Q9Y3C5 154 aa17.61■□□□□ 0.41
CMTM3-210ENST00000565666 TLN1Q9Y490 2541 aaKnown RBP17.61■□□□□ 0.41
CMTM3-210ENST00000565666 A0A1W2PPM1 405 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 FAM227AF5H4B4 570 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 PYCARD-AS1I3L0S3 204 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 OR7A17O14581 309 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 CELA2AP08217 269 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 GSTA1P08263 222 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 SBK3P0C264 359 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 PIK3CBP42338 1070 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 RAP1GDS1P52306 607 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 RAB38P57729 211 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 OR4D2P58180 307 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 RUNX2Q13950 521 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 AP5B1Q2VPB7 878 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 BTBD16Q32M84 506 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 TMEM35AQ53FP2 167 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 SFT2D3Q587I9 215 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 QSOX2Q6ZRP7 698 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 RIPOR1Q6ZS17 1223 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 TDRPQ86YL5 185 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 RNF175Q8N4F7 328 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 RBMXL3Q8N7X1 1067 aaKnown RBP17.6■□□□□ 0.41
CMTM3-210ENST00000565666 ARMC2Q8NEN0 867 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 OR52B6Q8NGF0 335 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 HUS1BQ8NHY5 278 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 ADAMTS18Q8TE60 1221 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 PPP4R1Q8TF05 950 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 NSUN5Q96P11 429 aaKnown RBP17.6■□□□□ 0.41
CMTM3-210ENST00000565666 CDK15Q96Q40 435 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 MTERF1Q99551 399 aaKnown RBP17.6■□□□□ 0.41
CMTM3-210ENST00000565666 LPAR4Q99677 370 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 CENPKQ9BS16 269 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 TBCDQ9BTW9 1192 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 OR51B5Q9H339 312 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 PRDM9Q9NQV7 894 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 DCDC2Q9UHG0 476 aa17.6■□□□□ 0.41
CMTM3-210ENST00000565666 CFAP46Q8IYW2 2715 aa17.59■□□□□ 0.41
CMTM3-210ENST00000565666 TTLL8A6PVC2 850 aa17.59■□□□□ 0.41
CMTM3-210ENST00000565666 H0YIV9 168 aa17.59■□□□□ 0.41
CMTM3-210ENST00000565666 SAP18O00422 153 aaKnown RBP17.59■□□□□ 0.41
CMTM3-210ENST00000565666 CDH16O75309 829 aa17.59■□□□□ 0.41
CMTM3-210ENST00000565666 GLRA3O75311 464 aa17.59■□□□□ 0.41
CMTM3-210ENST00000565666 RPS17P08708 135 aaKnown RBP17.59■□□□□ 0.41
CMTM3-210ENST00000565666 SSR2P43308 183 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms