RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 EVCP57679 992 aa3.64□□□□□ -1.83
UBR1-205ENST00000564540 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.64□□□□□ -1.83
UBR1-205ENST00000564540 TMEM182Q6ZP80 229 aaPredicted RBP3.64□□□□□ -1.83
UBR1-205ENST00000564540 C15orf52Q6ZUT6 534 aaKnown RBP3.64□□□□□ -1.83
UBR1-205ENST00000564540 ADCK1Q86TW2 530 aa3.64□□□□□ -1.83
UBR1-205ENST00000564540 NCOA7Q8NI08 942 aa3.64□□□□□ -1.83
UBR1-205ENST00000564540 CD99L2Q8TCZ2 262 aa3.64□□□□□ -1.83
UBR1-205ENST00000564540 CNDP2Q96KP4 475 aaKnown RBP3.64□□□□□ -1.83
UBR1-205ENST00000564540 DBF4Q9UBU7 674 aaPredicted RBP3.64□□□□□ -1.83
UBR1-205ENST00000564540 SALL1Q9NSC2 1324 aa3.64□□□□□ -1.83
UBR1-205ENST00000564540 A0A1B0GTH9 108 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 TRIM49BA6NDI0 452 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 TCP10L2B9ZVM9 353 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 FIBPO43427 364 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 VENTXO95231 258 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 PGLSO95336 258 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 MOCS2O96007 188 aaPredicted RBP3.63□□□□□ -1.83
UBR1-205ENST00000564540 ANKRD34CP0C6C1 535 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 SP9P0CG40 484 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 BDNFP23560 247 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 FCGR2BP31994 310 aaPredicted RBP3.63□□□□□ -1.83
UBR1-205ENST00000564540 FCGR2CP31995 323 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 NUCB1Q02818 461 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 MAPK11Q15759 364 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 TMEM44Q2T9K0 475 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 RNLSQ5VYX0 342 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 KLHL10Q6JEL2 608 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 C17orf107Q6ZR85 190 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 OR8H2Q8N162 312 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 CD177Q8N6Q3 437 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 MGME1Q9BQP7 344 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 RBM24Q9BX46 236 aaKnown RBP3.63□□□□□ -1.83
UBR1-205ENST00000564540 TMX4Q9H1E5 349 aaPredicted RBP3.63□□□□□ -1.83
UBR1-205ENST00000564540 LMAN1LQ9HAT1 526 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 MRGBPQ9NV56 204 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 VSIG4Q9Y279 399 aa3.63□□□□□ -1.83
UBR1-205ENST00000564540 ZNF732B4DXR9 585 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 ANHXE9PGG2 379 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 PLOD3O60568 738 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 OR6B1O95007 311 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 GBAP04062 536 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 ADRA2CP18825 462 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 KLK2P20151 261 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 CRYBA2P53672 197 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 TEX35Q5T0J7 233 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 TXNRD3NBQ6F5E7 133 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 TCEAL6Q6IPX3 200 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 ZNF770Q6IQ21 691 aaPredicted RBP3.62□□□□□ -1.83
UBR1-205ENST00000564540 EMBQ6PCB8 327 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 AGAP11Q8TF27 550 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 TSSK2Q96PF2 358 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 TNFRSF13CQ96RJ3 184 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 UBQLN3Q9H347 655 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 DEPPQ9NTK1 212 aa3.62□□□□□ -1.83
UBR1-205ENST00000564540 NOCTQ9UK39 431 aaKnown RBP3.62□□□□□ -1.83
UBR1-205ENST00000564540 A0A087WV48 116 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 TRBV5-4A0A0C4DH59 114 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 A0A1W2PQ72 361 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 TSPY2A6NKD2 308 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 E9PAM4 449 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 SEMA4FO95754 770 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 ANGPTL1O95841 491 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 MT-ND1P03886 318 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 THY1P04216 161 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 FAM58BPP0C7Q3 252 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 FAM200BP0CF97 657 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 PRKCIP41743 596 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 OR3A3P47888 321 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 ZNF41P51814 821 aaPredicted RBP3.61□□□□□ -1.83
UBR1-205ENST00000564540 NAGLUP54802 743 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 CNTN1Q12860 1018 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 PPA1Q15181 289 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 POM121L1PQ3SYA9 428 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 FAM91A1Q658Y4 838 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 CLEC4GQ6UXB4 293 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 TMUB2Q71RG4 321 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 SPATA21Q7Z572 469 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 ZBED8Q8IZ13 594 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 TDHQ8IZJ6 230 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 ITLN1Q8WWA0 313 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 SMPDL3AQ92484 453 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 SIPA1Q96FS4 1042 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 NACAP1Q9BZK3 213 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 SLITRK2Q9H156 845 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 PLEKHA3Q9HB20 300 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 TNFRSF19Q9NS68 423 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 NFKBIL1Q9UBC1 381 aaPredicted RBP3.61□□□□□ -1.83
UBR1-205ENST00000564540 PCDHGA1Q9Y5H4 931 aa3.61□□□□□ -1.83
UBR1-205ENST00000564540 LOC390937A0A1W2PQ73 354 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 SRD5A2P31213 254 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 SLC1A4P43007 532 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 PEX3P56589 373 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 BACE1P56817 501 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 TRA2BP62995 288 aaKnown RBP3.6□□□□□ -1.83
UBR1-205ENST00000564540 CYLC2Q14093 348 aaPredicted RBP3.6□□□□□ -1.83
UBR1-205ENST00000564540 ECSCRQ19T08 205 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 ZRANB3Q5FWF4 1079 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 SHEQ5VZ18 495 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 SLC27A4Q6P1M0 643 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 BAIAP2L2Q6UXY1 529 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms