RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 DAZAP2Q15038 168 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-204ENST00000563739 SLC25A35Q3KQZ1 300 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 FBXL19-AS1Q494R0 122 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 DEFB134Q4QY38 66 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 C1orf185Q5T7R7 199 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 RIPPLY2Q5TAB7 128 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 CAPN13Q6MZZ7 669 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-204ENST00000563739 CAMKMTQ7Z624 323 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 CAMKVQ8NCB2 501 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 PPHLN1Q8NEY8 458 aaKnown RBP9.61□□□□□ -0.87
SF3B3-204ENST00000563739 OR4K1Q8NGD4 311 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 SPATA3Q8NHX4 192 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 SLC13A3Q8WWT9 602 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 TMEM125Q96AQ2 219 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 THAP11Q96EK4 314 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 PTCHD1Q96NR3 888 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 OR4K3Q96R72 315 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 DESI2Q9BSY9 194 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 KIFC1Q9BW19 673 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 SLC6A16Q9GZN6 736 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 RRAGDQ9NQL2 400 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-204ENST00000563739 RAB6BQ9NRW1 208 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 FAM114A2Q9NRY5 505 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 ZFATQ9P243 1243 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 OR14I1A6ND48 311 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 USP27XA6NNY8 438 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 SYT5O00445 386 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 AQP7O14520 342 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 ZNF189O75820 626 aaPredicted RBP9.6□□□□□ -0.87
SF3B3-204ENST00000563739 ALOX12P18054 663 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 IL10P22301 178 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 TACR1P25103 407 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 MGAT1P26572 445 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 RPL22P35268 128 aaKnown RBP9.6□□□□□ -0.87
SF3B3-204ENST00000563739 HSD17B2P37059 387 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 PPARGP37231 505 aaPredicted RBP9.6□□□□□ -0.87
SF3B3-204ENST00000563739 SOX3P41225 446 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 DGKQP52824 942 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 KRTAP1-1Q07627 177 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 HYAL4Q2M3T9 481 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 ZNF585AQ6P3V2 769 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 WDR53Q7Z5U6 358 aaPredicted RBP9.6□□□□□ -0.87
SF3B3-204ENST00000563739 CILP2Q8IUL8 1156 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 CPNE9Q8IYJ1 553 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 CYP4X1Q8N118 509 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 CA13Q8N1Q1 262 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 AGGF1Q8N302 714 aaeCLIP9.6□□□□□ -0.87
SF3B3-204ENST00000563739 ZNF321PQ8N8H1 164 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 ANKRD53Q8N9V6 530 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 B3GNT7Q8NFL0 401 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 ABHD11Q8NFV4 315 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 GSDMBQ8TAX9 411 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 NT5CQ8TCD5 201 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 UTP15Q8TED0 518 aaKnown RBP9.6□□□□□ -0.87
SF3B3-204ENST00000563739 SREK1Q8WXA9 508 aaKnown RBP9.6□□□□□ -0.87
SF3B3-204ENST00000563739 NCLNQ969V3 563 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 RASL10BQ96S79 203 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 EBNA1BP2Q99848 306 aaKnown RBP9.6□□□□□ -0.87
SF3B3-204ENST00000563739 AARSD1Q9BTE6 412 aaKnown RBP9.6□□□□□ -0.87
SF3B3-204ENST00000563739 DEFB126Q9BYW3 111 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 KLHL31Q9H511 634 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 PROK2Q9HC23 129 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 SLC24A3Q9HC58 644 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 SH2D2AQ9NP31 389 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 CCDC177Q9NQR7 707 aaPredicted RBP9.6□□□□□ -0.87
SF3B3-204ENST00000563739 PDE10AQ9Y233 779 aa9.6□□□□□ -0.87
SF3B3-204ENST00000563739 LRRC3CA6NJW4 275 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 BTNL10A8MVZ5 291 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 CLDN4O14493 209 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 FCHO1O14526 889 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 BCKDKO14874 412 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 CEP104O60308 925 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 OR2J2O76002 312 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 SYF2O95926 243 aaKnown RBP9.59□□□□□ -0.87
SF3B3-204ENST00000563739 TBX6O95947 436 aaPredicted RBP9.59□□□□□ -0.87
SF3B3-204ENST00000563739 HRGP04196 525 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 TUBB4AP04350 444 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 APRTP07741 180 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 RFPL3SP0C7P2 107 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 CCL3P10147 92 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 NPPBP16860 134 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 OGNP20774 298 aaKnown RBP9.59□□□□□ -0.87
SF3B3-204ENST00000563739 CEACAM8P31997 349 aaPredicted RBP9.59□□□□□ -0.87
SF3B3-204ENST00000563739 DNASE1L1P49184 302 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 DCAF7P61962 342 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 CCZ1BP86790 482 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 CCZ1P86791 482 aaPredicted RBP9.59□□□□□ -0.87
SF3B3-204ENST00000563739 PHKG1Q16816 387 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 ZNF750Q32MQ0 723 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 KIAA0930Q6ICG6 404 aaPredicted RBP9.59□□□□□ -0.87
SF3B3-204ENST00000563739 KIAA1328Q86T90 577 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 DENND6AQ8IWF6 608 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 LRRC8AQ8IWT6 810 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 ULK2Q8IYT8 1036 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 FAM109AQ8N4B1 249 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 OR10Q1Q8NGQ4 319 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 MCOLN3Q8TDD5 553 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 FAM222BQ8WU58 562 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 SCYL1Q96KG9 808 aa9.59□□□□□ -0.87
SF3B3-204ENST00000563739 ATG10Q9H0Y0 220 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms