RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 MDGA2Q7Z553 956 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 NAT8LQ8N9F0 302 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 ANKRD53Q8N9V6 530 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 NKX2-6A6NCS4 301 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 FAM90A27PA6NNH2 459 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 A8MUA0 341 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 MYO1DO94832 1006 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 HOXD4P09016 255 aaPredicted RBP17.4■□□□□ 0.38
NME3-204ENST00000563498 PGAM1P18669 254 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 ART1P52961 327 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 CRYMQ14894 314 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 BBS9Q3SYG4 887 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 EMC4Q5J8M3 183 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 RBM20Q5T481 1227 aaKnown RBP17.4■□□□□ 0.38
NME3-204ENST00000563498 GALNT7Q86SF2 657 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 CNTN4Q8IWV2 1026 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 GPALPP1Q8IXQ4 340 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 CA13Q8N1Q1 262 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 GPATCH11Q8N954 259 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 OR52N2Q8NGI0 321 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 MAGOHBQ96A72 148 aaKnown RBP17.4■□□□□ 0.38
NME3-204ENST00000563498 VMP1Q96GC9 406 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 AIF1LQ9BQI0 150 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 ZNF559Q9BR84 538 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 UCK2Q9BZX2 261 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 PELI2Q9HAT8 420 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 LZTFL1Q9NQ48 299 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 FBXW2Q9UKT8 454 aa17.4■□□□□ 0.38
NME3-204ENST00000563498 YARS2Q9Y2Z4 477 aaKnown RBP17.4■□□□□ 0.38
NME3-204ENST00000563498 TTC4O95801 387 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 SERPINA6P08185 405 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 CCDC175P0C221 793 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 HNF4AP41235 474 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 SSR4P51571 173 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 GPR143P51810 404 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 GPR85P60893 370 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 CES4AQ5XG92 561 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 RGS9BPQ6ZS82 235 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 SCUBE1Q8IWY4 988 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 PDLIM2Q96JY6 352 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 RHBGQ9H310 441 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 ZNF223Q9UK11 482 aaPredicted RBP17.39■□□□□ 0.37
NME3-204ENST00000563498 SPG11Q96JI7 2443 aa17.39■□□□□ 0.37
NME3-204ENST00000563498 CTAGE15A4D2H0 777 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 GOLGA6L6A8MZA4 724 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 PDE9AO76083 593 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 AHSGP02765 367 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 HSD17B7P56937 341 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 PMPCAQ10713 525 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 PDAP1Q13442 181 aaKnown RBP17.38■□□□□ 0.37
NME3-204ENST00000563498 CYP1B1Q16678 543 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 NXPE4Q6UWF7 544 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 CTAGE6Q86UF2 777 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 CCDC71Q8IV32 467 aaPredicted RBP17.38■□□□□ 0.37
NME3-204ENST00000563498 PPIL6Q8IXY8 311 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 RPRMLQ8N4K4 120 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 PSD4Q8NDX1 1056 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 CREB3L4Q8TEY5 395 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 POM121Q96HA1 1249 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 PDLIM5Q96HC4 596 aaKnown RBP17.38■□□□□ 0.37
NME3-204ENST00000563498 SEC16BQ96JE7 1060 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 TSNARE1Q96NA8 513 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 CCDC77Q9BR77 488 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 NPLQ9BXD5 320 aaPredicted RBP17.38■□□□□ 0.37
NME3-204ENST00000563498 KLHL31Q9H511 634 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 ZDHHC11Q9H8X9 412 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 DEPPQ9NTK1 212 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 KCMF1Q9P0J7 381 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 ERVK-11Q9UQG0 969 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 DYRK1BQ9Y463 629 aa17.38■□□□□ 0.37
NME3-204ENST00000563498 OR14I1A6ND48 311 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 SYNDIG1LA6NDD5 238 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 C4orf51C9J302 202 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 ACOT7O00154 380 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 ZFAND5O76080 213 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 GUCA1CO95843 209 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 NUP107P57740 925 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 STXBP1P61764 594 aaKnown RBP17.37■□□□□ 0.37
NME3-204ENST00000563498 PPIAP62937 165 aaKnown RBP17.37■□□□□ 0.37
NME3-204ENST00000563498 SPANXN3Q5MJ09 141 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 CCDC137Q6PK04 289 aaKnown RBP17.37■□□□□ 0.37
NME3-204ENST00000563498 SBSNQ6UWP8 590 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 TMEM200AQ86VY9 491 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 THOC6Q86W42 341 aaKnown RBP17.37■□□□□ 0.37
NME3-204ENST00000563498 CLYBLQ8N0X4 340 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 RASGEF1CQ8N431 466 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 NCLNQ969V3 563 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 NAT9Q9BTE0 207 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 DEFB127Q9H1M4 99 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 CORO1CQ9ULV4 474 aaPredicted RBP17.37■□□□□ 0.37
NME3-204ENST00000563498 CLDN16Q9Y5I7 305 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 KCNE2Q9Y6J6 123 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 ITPR3Q14573 2671 aa17.37■□□□□ 0.37
NME3-204ENST00000563498 PHF3Q92576 2039 aaKnown RBP17.37■□□□□ 0.37
NME3-204ENST00000563498 INTS1Q8N201 2190 aaKnown RBP17.36■□□□□ 0.37
NME3-204ENST00000563498 FAM221AA4D161 298 aa17.36■□□□□ 0.37
NME3-204ENST00000563498 A8MVJ9 347 aa17.36■□□□□ 0.37
NME3-204ENST00000563498 CLDN4O14493 209 aa17.36■□□□□ 0.37
NME3-204ENST00000563498 KLK8O60259 260 aa17.36■□□□□ 0.37
NME3-204ENST00000563498 DNAJA1P31689 397 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms