RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CCT6BQ92526 530 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 UBE2E3Q969T4 207 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 L3HYPDHQ96EM0 354 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 PEX11GQ96HA9 241 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 IP6K3Q96PC2 410 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ARHGAP9Q9BRR9 750 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ERVK-6Q9BXR3 956 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ZNF717Q9BY31 904 aaPredicted RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 REXO4Q9GZR2 422 aaKnown RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 OR51B5Q9H339 312 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 CLK4Q9HAZ1 481 aaKnown RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 DMRT3Q9NQL9 472 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 MKS1Q9NXB0 559 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 KCMF1Q9P0J7 381 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 TUBD1Q9UJT1 453 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 FBXL4Q9UKA2 621 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 MKL2Q9ULH7 1088 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ZNF462Q96JM2 2506 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 SPENQ96T58 3664 aaKnown RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 URADA6NGE7 173 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 MAGEB17A8MXT2 336 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 TGFBR3LH3BV60 316 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 SAP18O00422 153 aaKnown RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 RTCAO00442 366 aaKnown RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 UBFD1O14562 309 aaKnown RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 COPEO14579 308 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 SH3BGRLO75368 114 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 TGFB1P01137 390 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 HEXBP07686 556 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 FHP07954 510 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 COX6A1P12074 109 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 TAC1P20366 129 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 NR1D1P20393 614 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 IL10P22301 178 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 CERS1P27544 350 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 SERPINB1P30740 379 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 PIK3CBP42338 1070 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 CCT5P48643 541 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 CCNG1P51959 295 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 HNRNPFP52597 415 aaKnown RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 SOX8P57073 446 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 RPS13P62277 151 aaKnown RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 BTG2P78543 158 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 CLCQ05315 142 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 IFFO1Q0D2I5 559 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 PCOLCEQ15113 449 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 RBBP7Q16576 425 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 CPSF6Q16630 551 aaKnown RBP eCLIP8.05□□□□□ -1.12
UBR1-204ENST00000563239 GGTA1PQ4G0N0 100 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 TNFAIP8L3Q5GJ75 292 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 BEND6Q5SZJ8 279 aaPredicted RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 DEPDC1Q5TB30 811 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 KHDRBS2Q5VWX1 349 aaKnown RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 FAAH2Q6GMR7 532 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 NIPAL1Q6NVV3 410 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 LANCL3Q6ZV70 420 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 MYLK4Q86YV6 388 aaPredicted RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 ZNF843Q8N446 348 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 TMEM52Q8NDY8 209 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 PLPP5Q8NEB5 264 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 FDCSPQ8NFU4 85 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 OR4F6Q8NGB9 312 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 TRPC4APQ8TEL6 797 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 TSLPQ969D9 159 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 TBC1D20Q96BZ9 403 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 ZBTB9Q96C00 473 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 CMTM7Q96FZ5 175 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 IMMP1LQ96LU5 166 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 ZIM3Q96PE6 472 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 OR1F2PQ96R84 312 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 MTERF1Q99551 399 aaKnown RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 WDR77Q9BQA1 342 aaPredicted RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 NUDT9Q9BW91 350 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 SORBS1Q9BX66 1292 aaKnown RBP8.05□□□□□ -1.12
UBR1-204ENST00000563239 RBCK1Q9BYM8 510 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 ZNF700Q9H0M5 742 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 GSTO2Q9H4Y5 243 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 PSD3Q9NYI0 1048 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 ADGRE2Q9UHX3 823 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 GRID1Q9ULK0 1009 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 PLLPQ9Y342 182 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 PCDHGA11Q9Y5H2 935 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 CLDN16Q9Y5I7 305 aa8.05□□□□□ -1.12
UBR1-204ENST00000563239 NUP210LQ5VU65 1888 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 IGKV3D-11A0A0A0MRZ8 115 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 IGHV1-45A0A0A0MS14 117 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 IGHV3-20A0A0C4DH32 117 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 A6NL46 340 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 FOXE1O00358 373 aaPredicted RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 CYR61O00622 381 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 PEX12O00623 359 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 PLPP1O14494 284 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 TYROBPO43914 113 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 B4GALT2O60909 372 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 SPAG7O75391 227 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 CDC123O75794 336 aaPredicted RBP8.04□□□□□ -1.12
UBR1-204ENST00000563239 SUPT7LO94864 414 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 OR4F21O95013 312 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 SCELO95171 688 aa8.04□□□□□ -1.12
UBR1-204ENST00000563239 OTCP00480 354 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms