RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TCRBV16S1A1N1A0A5B0 115 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 KLRC4-KLRK1H3BQV0 150 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 PFDN6O15212 129 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 KLK8O60259 260 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 ATP6AP2O75787 350 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 GLI4P10075 376 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 NPPBP16860 134 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 SAT1P21673 171 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 TRHRP34981 398 aaPredicted RBP10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 GRK3P35626 688 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 SOX3P41225 446 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 DNASE1L1P49184 302 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 CCR8P51685 355 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 HERC3Q15034 1050 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 RBBP5Q15291 538 aaKnown RBP10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 RTL6Q6ICC9 239 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 TMEM211Q6ICI0 200 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 PAQR3Q6TCH7 311 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 EID3Q8N140 333 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 AFAP1L2Q8N4X5 818 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 ANKRD53Q8N9V6 530 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 SPC24Q8NBT2 197 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 PSD4Q8NDX1 1056 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 OR2M7Q8NG81 312 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 UTP15Q8TED0 518 aaKnown RBP10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 CAPZA3Q96KX2 299 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 SMC6Q96SB8 1091 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 TCF12Q99081 682 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 INTS10Q9NVR2 710 aaKnown RBP10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 CRIM1Q9NZV1 1036 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 ST6GALNAC2Q9UJ37 374 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 TRMT6Q9UJA5 497 aaKnown RBP10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 SLC22A7Q9Y694 548 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 MAD1L1Q9Y6D9 718 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 MED12Q93074 2177 aa10.87□□□□□ -0.67
NSMCE1-202ENST00000561960 ZCWPW2A0A1B0GU75 182 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 FOXO6A8MYZ6 492 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 PSMD12O00232 456 aaPredicted RBP10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 CTAG2O75638 210 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 FGGP02679 453 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 PAMP19021 973 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 JAK1P23458 1154 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 UQCRC1P31930 480 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 SSR4P51571 173 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 ADARP55265 1226 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 ID2Q02363 134 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 RELAQ04206 551 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 DHX9Q08211 1270 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 C18orf21Q32NC0 220 aaPredicted RBP10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 HSP90AA5PQ58FG0 334 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 HECTD2Q5U5R9 776 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 ARHGAP11AQ6P4F7 1023 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 TMPRSS11BQ86T26 416 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 LGI4Q8N135 537 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 CA13Q8N1Q1 262 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 ZFP62Q8NB50 900 aaPredicted RBP10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 C16orf52Q8NHV5 167 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 CCT6BQ92526 530 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 KCNJ9Q92806 393 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 NEIL2Q969S2 332 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 KIAA1191Q96A73 305 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 SNF8Q96H20 258 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 CALR3Q96L12 384 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 TTYH2Q9BSA4 534 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 AARSD1Q9BTE6 412 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 SGPP1Q9BX95 441 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 TTTY12Q9BZ98 90 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 SLC6A16Q9GZN6 736 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 CLEC4MQ9H2X3 399 aaPredicted RBP10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 SEMA4BQ9NPR2 832 aaPredicted RBP10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 PRDM9Q9NQV7 894 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 ARL15Q9NXU5 204 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 KCNN3Q9UGI6 736 aa10.86□□□□□ -0.67
NSMCE1-202ENST00000561960 IGKV3D-11A0A0A0MRZ8 115 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 TMEM200CA6NKL6 621 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 A8MVJ9 347 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 PROM1O43490 865 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 NRDCO43847 1150 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 ZNF354AO60765 605 aaPredicted RBP10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 TUBB4AP04350 444 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 CYC1P08574 325 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 RNH1P13489 461 aaKnown RBP10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 ENO3P13929 434 aaPredicted RBP10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 TPSB2P20231 275 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 ACVR2AP27037 513 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 CLCN2P51788 898 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 DGKQP52824 942 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 BTN3A2P78410 334 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 RGS1Q08116 209 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 RUNX2Q13950 521 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 TPSAB1Q15661 275 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 CCNG2Q16589 344 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 ADNP2Q6IQ32 1131 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 TTC27Q6P3X3 843 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 LCTLQ6UWM7 567 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 ARSKQ6UWY0 536 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 QSOX2Q6ZRP7 698 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 ABHD13Q7L211 337 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 PCGF5Q86SE9 256 aa10.85□□□□□ -0.67
NSMCE1-202ENST00000561960 POGLUT1Q8NBL1 392 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms