RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 DCDC2Q9UHG0 476 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 PCDHGA11Q9Y5H2 935 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 IGHV1-45A0A0A0MS14 117 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 SAP18O00422 153 aaKnown RBP18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 UGDHO60701 494 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 B4GALT2O60909 372 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 GLRA3O75311 464 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 RNH1P13489 461 aaKnown RBP18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 TSPAN8P19075 237 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 JAK1P23458 1154 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 CERS1P27544 350 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 CDH13P55290 713 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 MYBPC3Q14896 1274 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 ABRAXAS2Q15018 415 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 ABHD17CQ6PCB6 329 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 TMEM205Q6UW68 189 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 C4orf33Q8N1A6 199 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 CA13Q8N1Q1 262 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 OR51B5Q9H339 312 aa18.77■□□□□ 0.6
TSPAN3-210ENST00000561277 IGHV3-20A0A0C4DH32 117 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 RTCAO00442 366 aaKnown RBP18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 PCDH17O14917 1159 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 B3GALT2O43825 422 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 DLX3O60479 287 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 KRT4P19013 534 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 SERPINB1P30740 379 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 HERVK_113P63132 956 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 RHAGQ02094 409 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 TGM3Q08188 693 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 Q0VFX4 171 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 ZRSR2Q15696 482 aaKnown RBP18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 SH2D5Q6ZV89 423 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 NDUFAF7Q7L592 441 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 L3MBTL4Q8NA19 623 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 PPP4R1Q8TF05 950 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 ZNF483Q8TF39 744 aaPredicted RBP18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 TSLPQ969D9 159 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 REPS1Q96D71 796 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 CMTM7Q96FZ5 175 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 QRFPRQ96P65 431 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 TMEM237Q96Q45 408 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 ERVK-6Q9BXR3 956 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 DMRT3Q9NQL9 472 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 C19orf25Q9UFG5 118 aaPredicted RBP18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 EMCNQ9ULC0 261 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 ZNF451Q9Y4E5 1061 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 LOC102723996A0A087X1L8 192 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 FAM227AF5H4B4 570 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 H0YIV9 168 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 SEC24DO94855 1032 aaPredicted RBP18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 ATP5F1P24539 256 aaPredicted RBP18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 MTTPP55157 894 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 TRAF3Q13114 568 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 RUNX2Q13950 521 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 PCOLCEQ15113 449 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 NSDHLQ15738 373 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 VWA5B1Q5TIE3 1220 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 IRAK1BP1Q5VVH5 260 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 KHDRBS2Q5VWX1 349 aaKnown RBP18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 CHSY3Q70JA7 882 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 THOC3Q96J01 351 aaKnown RBP18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 KCNC2Q96PR1 638 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 SERINC2Q96SA4 455 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 CLK4Q9HAZ1 481 aaKnown RBP18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 RIC8BQ9NVN3 520 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 ADGRE2Q9UHX3 823 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 RAB21Q9UL25 225 aa18.76■□□□□ 0.59
TSPAN3-210ENST00000561277 SCN2AQ99250 2005 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 A0A1B0GTL3 188 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 PPP6CO00743 305 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 COPEO14579 308 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 SUPT7LO94864 414 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 ALPPP05187 535 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 CYC1P08574 325 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 NEK2P51955 445 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 RAP1GDS1P52306 607 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 RPS13P62277 151 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 PHEXP78562 749 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 TMEM35AQ53FP2 167 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 ZNF678Q5SXM1 525 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 TTC19Q6DKK2 380 aaPredicted RBP18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 CPEB2Q7Z5Q1 589 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 UBE3DQ7Z6J8 389 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 ANKRD37Q7Z713 158 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 ZNF605Q86T29 641 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 RIBC1Q8N443 379 aaPredicted RBP18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 AMER2Q8N7J2 671 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 FAM47BQ8NA70 645 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 TEX19Q8NA77 164 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 SRFBP1Q8NEF9 429 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 OR4F6Q8NGB9 312 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 TRPC4APQ8TEL6 797 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 MTFMTQ96DP5 389 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 SMAD5Q99717 465 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 NTMT1Q9BV86 223 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 C1QTNF3Q9BXJ4 246 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 ZNF700Q9H0M5 742 aa18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 C12orf65Q9H3J6 166 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 ZNF552Q9H707 407 aaPredicted RBP18.75■□□□□ 0.59
TSPAN3-210ENST00000561277 PLAAQ9Y263 795 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms