RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 UBXN8O00124 270 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 CCNT2O60583 730 aaKnown RBP16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 PRMT3O60678 531 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 SUPT3HO75486 399 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 TBX6O95947 436 aaPredicted RBP16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 LDLRP01130 860 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 EPORP19235 508 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 CD22P20273 847 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 KCNC1P48547 511 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 BTN3A2P78410 334 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 IRF9Q00978 393 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 PMP22Q01453 160 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 DOC2AQ14183 400 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 XKR6Q5GH73 641 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 CDKL4Q5MAI5 379 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 CRYBG3Q68DQ2 2970 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 H3F3CQ6NXT2 135 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 TBC1D1Q86TI0 1168 aaPredicted RBP16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 KIF2BQ8N4N8 673 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 TTLQ8NG68 377 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 M1APQ8TC57 530 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 MS4A6EQ96DS6 147 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 FAR2Q96K12 515 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 ZNF354BQ96LW1 612 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 C5orf34Q96MH7 638 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 EHD1Q9H4M9 534 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 IGSF5Q9NSI5 407 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 ANKRD10Q9NXR5 420 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 NUDT4Q9NZJ9 180 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 COPG2Q9UBF2 871 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 PTBP2Q9UKA9 531 aaKnown RBP16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 SLC5A6Q9Y289 635 aa16.14■□□□□ 0.17
CDC42BPB-208ENST00000561271 IGKV3D-11A0A0A0MRZ8 115 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 LRIT2A6NDA9 550 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 PRAMEF2O60811 474 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 KERAO60938 352 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 CLEC3AO75596 197 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 LTA4HP09960 611 aaKnown RBP16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 GSTM2P28161 218 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 TDGF1P3P51864 188 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 UAP1Q16222 522 aaPredicted RBP16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 LRRC70Q7Z2Q7 622 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 ISCA2Q86U28 154 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 CENPLQ8N0S6 344 aaPredicted RBP16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 SUN3Q8TAQ9 357 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 KCTD4Q8WVF5 259 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 NR4A3Q92570 626 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 ZNF592Q92610 1267 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 PTCD3Q96EY7 689 aaKnown RBP16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 ATOH8Q96SQ7 321 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 CAPS2Q9BXY5 557 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 NT5DC2Q9H857 520 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 NMRAL1Q9HBL8 299 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 NECTIN3Q9NQS3 549 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 PRDM9Q9NQV7 894 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 OSGIN2Q9Y236 505 aa16.13■□□□□ 0.17
CDC42BPB-208ENST00000561271 FREM3P0C091 2139 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 TCRBV16S1A1N1A0A5B0 115 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 ANKDD1BA6NHY2 528 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 SAGE2PA6NJ88 616 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 A8MUA0 341 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 DDAH2O95865 285 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 CERS1P27544 350 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 CRABP2P29373 138 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 HNRNPFP52597 415 aaKnown RBP16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 PLA2G16P53816 162 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 TAS2R50P59544 299 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 CHIT1Q13231 466 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 TUBA3CQ13748 450 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 RUNX2Q13950 521 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 MEP1AQ16819 746 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 WHAMMP3Q1A5X7 153 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 ZNF766Q5HY98 468 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 MROH9Q5TGP6 573 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 ZNF324BQ6AW86 544 aaPredicted RBP16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 TRIM40Q6P9F5 258 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 TUBA3EQ6PEY2 450 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 SLC5A8Q8N695 610 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 FAM47BQ8NA70 645 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 NOA1Q8NC60 698 aaKnown RBP16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 OR2L5Q8NG80 312 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 STAG3L4Q8TBR4 150 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 UBTD2Q8WUN7 234 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 NXNL1Q96CM4 212 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 WDR34Q96EX3 536 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 QRFPRQ96P65 431 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 SIGLEC12Q96PQ1 595 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 EFCAB11Q9BUY7 163 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 HES7Q9BYE0 225 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 CD244Q9BZW8 370 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 PITHD1Q9GZP4 211 aaPredicted RBP16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 CLK4Q9HAZ1 481 aaKnown RBP16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 SNX15Q9NRS6 342 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 NINJ2Q9NZG7 142 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 ABI3Q9P2A4 366 aa16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 ZNF490Q9ULM2 529 aaPredicted RBP16.12■□□□□ 0.17
CDC42BPB-208ENST00000561271 HMX2A2RU54 273 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 GABRR3A8MPY1 467 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 TGFBR3LH3BV60 316 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 B3GALT2O43825 422 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms