RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CH25HO95992 272 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 CD9P21926 228 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 NTHL1P78549 312 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 DEFB134Q4QY38 66 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 IDNKQ5T6J7 187 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 OSTF1Q92882 214 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 SLC2A13Q96QE2 648 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 REEP4Q9H6H4 257 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 GDE1Q9NZC3 331 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 ZFR2Q9UPR6 939 aaKnown RBP12.99□□□□□ -0.33
TRAF3-208ENST00000560371 FKBP7Q9Y680 259 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 ITGA10O75578 1167 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 PRKD3O94806 890 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 RNF130Q86XS8 419 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 APCDD1Q8J025 514 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 SDR16C5Q8N3Y7 309 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 YIPF7Q8N8F6 280 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 AQP11Q8NBQ7 271 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 RBP7Q96R05 134 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 KCNA7Q96RP8 456 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 GRHPRQ9UBQ7 328 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 GRXCR1A8MXD5 290 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 RNF13O43567 381 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 FARS2O95363 451 aaKnown RBP12.99□□□□□ -0.33
TRAF3-208ENST00000560371 RNH1P13489 461 aaKnown RBP12.99□□□□□ -0.33
TRAF3-208ENST00000560371 ECHS1P30084 290 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 SCN1BQ07699 218 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 SLC2A7Q6PXP3 512 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 GPRIN1Q7Z2K8 1008 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 FIBINQ8TAL6 211 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 POPDC3Q9HBV1 291 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 ZDHHC7Q9NXF8 308 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 OARD1Q9Y530 152 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 EIF1AYO14602 144 aaKnown RBP12.99□□□□□ -0.33
TRAF3-208ENST00000560371 MAFKO60675 156 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 THEGLP0DJG4 465 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 WDR4P57081 412 aaKnown RBP12.99□□□□□ -0.33
TRAF3-208ENST00000560371 C4orf46Q504U0 113 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 SCML1Q9UN30 329 aa12.99□□□□□ -0.33
TRAF3-208ENST00000560371 FAM172BPA6NC97 362 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 EI24O14681 340 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 GSTT2BP0CG30 244 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 SPINT3P49223 89 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 HHEXQ03014 270 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 FAM189A2Q15884 450 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 KIAA0319Q5VV43 1072 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 NRROSQ86YC3 692 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 ASB9Q96DX5 294 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 PYURFQ96I23 114 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 ORAI3Q9BRQ5 295 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 DPH7Q9BTV6 452 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 TAS2R1Q9NYW7 299 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 TBX1O43435 398 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 RAB36O95755 333 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 C1GALT1C1LP0DN25 315 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 GABRA3P34903 492 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 POU6F2P78424 691 aaPredicted RBP12.98□□□□□ -0.33
TRAF3-208ENST00000560371 ABHD18Q0P651 414 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 TNFAIP8L3Q5GJ75 292 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 PYHIN1Q6K0P9 492 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 GLIS1Q8NBF1 620 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 HTRA1Q92743 480 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 MCM3APO60318 1980 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 DNAJC25-GNG10A0A024R161 153 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 PITX1P78337 314 aaPredicted RBP12.98□□□□□ -0.33
TRAF3-208ENST00000560371 KHDC1Q4VXA5 237 aaKnown RBP12.98□□□□□ -0.33
TRAF3-208ENST00000560371 HSDL2Q6YN16 418 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 CSNK1A1LQ8N752 337 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 JPH3Q8WXH2 748 aaPredicted RBP12.98□□□□□ -0.33
TRAF3-208ENST00000560371 MRGPRX2Q96LB1 330 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 ZBTB26Q9HCK0 441 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 OAZ3Q9UMX2 235 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 PTGESO14684 152 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 PAX7P23759 505 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 RPS15AP62244 130 aaKnown RBP12.98□□□□□ -0.33
TRAF3-208ENST00000560371 C5orf22Q49AR2 442 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 SLC36A4Q6YBV0 504 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 LINGO2Q7L985 606 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 BORCS5Q969J3 196 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 MOAP1Q96BY2 351 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 TBC1D24Q9ULP9 559 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 ADAMTSL3P82987 1691 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 TOPAZ1Q8N9V7 1692 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 RPLP0P05388 317 aaKnown RBP12.98□□□□□ -0.33
TRAF3-208ENST00000560371 EPCAMP16422 314 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 C10orf82Q8WW14 230 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF689Q96CS4 500 aaPredicted RBP12.98□□□□□ -0.33
TRAF3-208ENST00000560371 SIGLEC10Q96LC7 697 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 CADM1Q9BY67 442 aaKnown RBP12.98□□□□□ -0.33
TRAF3-208ENST00000560371 C14orf105Q9NVL8 296 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 GLDCP23378 1020 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 TM4SF4P48230 202 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 PITPNAQ00169 270 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 TMEM17Q86X19 198 aa12.98□□□□□ -0.33
TRAF3-208ENST00000560371 FAM227AF5H4B4 570 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ADRB3P13945 408 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 FMO3P31513 532 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 TBPL1P62380 186 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 MRPL49Q13405 166 aaKnown RBP12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ABCA11PQ4W5N1 156 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms