RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 DNAJC11Q9NVH1 559 aa19.34■□□□□ 0.69
ETFA-213ENST00000560309 MTO1Q9Y2Z2 717 aaKnown RBP19.34■□□□□ 0.69
ETFA-213ENST00000560309 UTP11Q9Y3A2 253 aaKnown RBP19.34■□□□□ 0.69
ETFA-213ENST00000560309 KLF2Q9Y5W3 355 aaPredicted RBP19.34■□□□□ 0.69
ETFA-213ENST00000560309 DNAJB6O75190 326 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 STK16O75716 305 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 CCDC166P0CW27 439 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 SSTR1P30872 391 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 TRHRP34981 398 aaPredicted RBP19.33■□□□□ 0.68
ETFA-213ENST00000560309 SPRP35270 261 aaPredicted RBP19.33■□□□□ 0.68
ETFA-213ENST00000560309 GDF5P43026 501 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 CLCN2P51788 898 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 MLF1P58340 268 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 BTG2P78543 158 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 SLBPQ14493 270 aaKnown RBP eCLIP19.33■□□□□ 0.68
ETFA-213ENST00000560309 HIST2H2ACQ16777 129 aaPredicted RBP19.33■□□□□ 0.68
ETFA-213ENST00000560309 PAGE2BQ5JRK9 111 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 GRTP1Q5TC63 336 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 HIST2H2AA3Q6FI13 130 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 SRFBP1Q8NEF9 429 aaKnown RBP19.33■□□□□ 0.68
ETFA-213ENST00000560309 TMEM125Q96AQ2 219 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 MS4A6EQ96DS6 147 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 WDR34Q96EX3 536 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 GPR137Q96N19 417 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 EFCAB11Q9BUY7 163 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 ROGDIQ9GZN7 287 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 SMYD2Q9NRG4 433 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 WWOXQ9NZC7 414 aa19.33■□□□□ 0.68
ETFA-213ENST00000560309 PPIEQ9UNP9 301 aaKnown RBP19.33■□□□□ 0.68
ETFA-213ENST00000560309 TEX15Q9BXT5 2789 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 TCRBV9S1A1TA0A576 114 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 FAM159BA6NKW6 160 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 CCL21O00585 134 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 B3GALT2O43825 422 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 NEURL1O76050 574 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 B3GALT4O96024 378 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 S100BP04271 92 aaPredicted RBP19.32■□□□□ 0.68
ETFA-213ENST00000560309 CD1DP15813 335 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 ADPRMQ3LIE5 342 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 SP5Q6BEB4 398 aaPredicted RBP19.32■□□□□ 0.68
ETFA-213ENST00000560309 TRIM40Q6P9F5 258 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.32■□□□□ 0.68
ETFA-213ENST00000560309 ZNF595Q8IYB9 648 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 ZNF808Q8N4W9 903 aaPredicted RBP19.32■□□□□ 0.68
ETFA-213ENST00000560309 POGLUT1Q8NBL1 392 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 NFAM1Q8NET5 270 aaPredicted RBP19.32■□□□□ 0.68
ETFA-213ENST00000560309 B3GNT7Q8NFL0 401 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 OR2L5Q8NG80 312 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 STAG3L4Q8TBR4 150 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 CCT6BQ92526 530 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 UBE2E3Q969T4 207 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 KIAA1191Q96A73 305 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 PTCD3Q96EY7 689 aaKnown RBP19.32■□□□□ 0.68
ETFA-213ENST00000560309 UBXN10Q96LJ8 280 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 REXO4Q9GZR2 422 aaKnown RBP19.32■□□□□ 0.68
ETFA-213ENST00000560309 RAB17Q9H0T7 212 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 ANKRD10Q9NXR5 420 aa19.32■□□□□ 0.68
ETFA-213ENST00000560309 CREBBPQ92793 2442 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 NCF1BA6NI72 391 aaPredicted RBP19.31■□□□□ 0.68
ETFA-213ENST00000560309 NCF1CA8MVU1 366 aaPredicted RBP19.31■□□□□ 0.68
ETFA-213ENST00000560309 ERI3O43414 337 aaKnown RBP19.31■□□□□ 0.68
ETFA-213ENST00000560309 SLC19A2O60779 497 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 NCF1P14598 390 aaPredicted RBP19.31■□□□□ 0.68
ETFA-213ENST00000560309 AGAP20933 346 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 MAOAP21397 527 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 HLCSP50747 726 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 RAB38P57729 211 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 RAB10P61026 200 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 ZKSCAN8Q15776 578 aaPredicted RBP19.31■□□□□ 0.68
ETFA-213ENST00000560309 TBCCQ15814 346 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 XKRXQ6PP77 449 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 CAPN12Q6ZSI9 719 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 GALNTL5Q7Z4T8 443 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 CCDC91Q7Z6B0 441 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 TICAM1Q8IUC6 712 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 AMER2Q8N7J2 671 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 PDPRQ8NCN5 879 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 SERINC2Q96SA4 455 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 DPH5Q9H2P9 285 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 RHBGQ9H310 441 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 NECTIN3Q9NQS3 549 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 KLHL1Q9NR64 748 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 PRTFDC1Q9NRG1 225 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 PTBP2Q9UKA9 531 aaKnown RBP19.31■□□□□ 0.68
ETFA-213ENST00000560309 CENPEQ02224 2701 aa19.31■□□□□ 0.68
ETFA-213ENST00000560309 CROCCQ5TZA2 2017 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 CCDC189A1A4V9 331 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 TAPBPO15533 448 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 RAD51CO43502 376 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 SLC25A12O75746 678 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 ESRRAP11474 423 aaPredicted RBP19.3■□□□□ 0.68
ETFA-213ENST00000560309 TPP2P29144 1249 aaPredicted RBP19.3■□□□□ 0.68
ETFA-213ENST00000560309 MTTPP55157 894 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 NAB1Q13506 487 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 EFTUD2Q15029 972 aaKnown RBP eCLIP19.3■□□□□ 0.68
ETFA-213ENST00000560309 MAPKAPK3Q16644 382 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 PDK4Q16654 411 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 XKR6Q5GH73 641 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 SCUBE1Q8IWY4 988 aa19.3■□□□□ 0.68
ETFA-213ENST00000560309 EID3Q8N140 333 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms