RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 TMPOP42166 694 aaKnown RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 GRIA1P42261 906 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CACNA2D1P54289 1103 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PEX3P56589 373 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SOX8P57073 446 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZXDAP98168 799 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 GALK2Q01415 458 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PTH1RQ03431 593 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 RELAQ04206 551 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 GABPAQ06546 454 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 MGAT2Q10469 447 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ILF3Q12906 894 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PDCLQ13371 301 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 LSAMPQ13449 338 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 C5orf64Q2M2E5 130 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 KIF19Q2TAC6 998 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 BSXQ3C1V8 233 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 GALNTL6Q49A17 601 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMEM35AQ53FP2 167 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 RUNDC3AQ59EK9 446 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 EPHA10Q5JZY3 1008 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 Q5PR19 223 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CBWD5Q5RIA9 395 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 C6orf10Q5SRN2 563 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLX4IPQ5VYV7 408 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 LIPJQ5W064 366 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 WSCD1Q658N2 575 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 KRT39Q6A163 491 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 TIGD3Q6B0B8 471 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 BRAT1Q6PJG6 821 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM180AQ6UWF9 173 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 METTL7BQ6UX53 244 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CLEC18BQ6UXF7 455 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 NPSR1Q6W5P4 371 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 RPTNQ6XPR3 784 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZBTB49Q6ZSB9 765 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 G2E3Q7L622 706 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 POLNQ7Z5Q5 900 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 DPPA2Q7Z7J5 298 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SETD3Q86TU7 594 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 MYPOPQ86VE0 399 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 WDR5BQ86VZ2 330 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 DCP2Q8IU60 420 aaKnown RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CCDC71Q8IV32 467 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 VSTM4Q8IW00 320 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SELENOHQ8IZQ5 122 aaKnown RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 RBFAQ8N0V3 343 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 GCNT2Q8N0V5 402 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 MMP21Q8N119 569 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 STK40Q8N2I9 435 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 MTURNQ8N3F0 131 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZBTB2Q8N680 514 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CPSF7Q8N684 471 aaKnown RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PQLC3Q8N755 202 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 NAT16Q8N8M0 369 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 L3MBTL4Q8NA19 623 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 C8orf58Q8NAV2 365 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMEM185AQ8NFB2 350 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 NUDT10Q8NFP7 164 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 DNERQ8NFT8 737 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR2L5Q8NG80 312 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR52N2Q8NGI0 321 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR4D10Q8NGI6 311 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR2L8Q8NGY9 312 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 GRPEL2Q8TAA5 225 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 VANGL1Q8TAA9 524 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 MAFIPQ8WZ33 124 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 GTF2H4Q92759 462 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 MAP4K1Q92918 833 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CAVIN3Q969G5 261 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMBIM1Q969X1 311 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 KLHL29Q96CT2 875 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SGTBQ96EQ0 304 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CHAMP1Q96JM3 812 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PPP1R36Q96LQ0 422 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 C3orf30Q96M34 536 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 RNF145Q96MT1 663 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 WFIKKN1Q96NZ8 548 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 GAD1Q99259 594 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 NPY6RQ99463 290 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF2Q9BSG1 426 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PCGF1Q9BSM1 259 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CHRDL1Q9BU40 450 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 DUSP26Q9BV47 211 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 TIPINQ9BVW5 301 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF717Q9BY31 904 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 NMNAT2Q9BZQ4 307 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 BCL2L14Q9BZR8 327 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC19A3Q9BZV2 496 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CLPBQ9H078 707 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC38A1Q9H2H9 487 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 NXF3Q9H4D5 531 aaKnown RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM83DQ9H4H8 585 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 WDR76Q9H967 626 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SYNPO2LQ9H987 977 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 VIPAS39Q9H9C1 493 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 BCO1Q9HAY6 547 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 LRRC4Q9HBW1 653 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 TNFRSF12AQ9NP84 129 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 RGS18Q9NS28 235 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms