RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 NTAN1Q96AB6 310 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 HYLS1Q96M11 299 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 COG8Q96MW5 612 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 UTS2RQ9UKP6 389 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR5H15A6NDH6 313 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR5H14A6NHG9 310 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 A6NHS1 94 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR5H1A6NKK0 313 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 SERPINF1P36955 418 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 AVL9Q8NBF6 648 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 JPH3Q8WXH2 748 aaPredicted RBP13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 TMBIM1Q969X1 311 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 ACO2Q99798 780 aaKnown RBP13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 SDHAF2Q9NX18 166 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 VPS29Q9UBQ0 182 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 POU2F3Q9UKI9 436 aa13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 PRDM15P57071 1507 aaPredicted RBP13.42□□□□□ -0.26
CSPG4P12-202ENST00000559989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 K7EPK0 472 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 SC5DO75845 299 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 VSX2P58304 361 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC10A1Q14973 349 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 FAM43BQ6ZT52 329 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 FAM71E2Q8N5Q1 922 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR56A1Q8NGH5 318 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 PHOSPHO1Q8TCT1 267 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 HS6ST2Q96MM7 605 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 POLMQ9NP87 494 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 KCNJ16Q9NPI9 418 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 TRAPPC13A5PLN9 417 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 ATP6V1G2-DDX39BF2Z307 99 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 CRYZL1O95825 349 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 TMEM41BQ5BJD5 291 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 HACD2Q6Y1H2 254 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 MAPK15Q8TD08 544 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 GAS2L1Q99501 681 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 BTBD2Q9BX70 525 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 PPIL3Q9H2H8 161 aaKnown RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 TFB2MQ9H5Q4 396 aaKnown RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF223Q9UK11 482 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 MRPS17Q9Y2R5 130 aaKnown RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 HERVK_113P63132 956 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 FAM199XQ6PEV8 388 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 KCTD18Q6PI47 426 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC15A3Q8IY34 581 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 TRAM1L1Q8N609 369 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 CMTM7Q96FZ5 175 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 ERVK-6Q9BXR3 956 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 J3QRK9 145 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 CAPN5O15484 640 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 CD9P21926 228 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 CX3CR1P49238 355 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 LRRC32Q14392 662 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 PPM1JQ5JR12 505 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 ARHGAP11AQ6P4F7 1023 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF695Q8IW36 515 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 LHX5Q9H2C1 402 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 DUS2Q9NX74 493 aaKnown RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 ESR1P03372 595 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 RSU1Q15404 277 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 C4orf17Q53FE4 359 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 RALGPS1Q5JS13 557 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 OTOP3Q7RTS5 596 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR5M3Q8NGP4 307 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 FAM83CQ9BQN1 747 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 CNTN6Q9UQ52 1028 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 A8MUA0 341 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 NDST2P52849 883 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 CASP6P55212 293 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 ERVK-25P63136 954 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC43A2Q8N370 569 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF439Q8NDP4 499 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 DCUN1D4Q92564 292 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 SPIN2AQ99865 258 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 SPIN2BQ9BPZ2 258 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 EVLQ9UI08 416 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 MGAT4BQ9UQ53 548 aa13.41□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC36A3Q495N2 470 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC22A10Q63ZE4 541 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 CEACAM20Q6UY09 585 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR56A3Q8NH54 315 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 FAM46BQ96A09 425 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ABCB8Q9NUT2 735 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ST14Q9Y5Y6 855 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 NPIPA7E9PJI5 369 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 STK17BO94768 372 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 TOXO94900 526 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 MT-CYBP00156 380 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 NPIPA8P0DM63 369 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 NDUFS1P28331 727 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 EPHX2P34913 555 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 SP3Q02447 781 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 CAMK2DQ13557 499 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 TLDC1Q6P9B6 456 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZSWIM9Q86XI8 627 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 C7orf57Q8NEG2 295 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR2AP1Q8NGE2 309 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 HERVK_113Q902F9 699 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms