RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TMEM109Q9BVC6 243 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 ROPN1BQ9BZX4 212 aaPredicted RBP17.65■□□□□ 0.42
CASC4-209ENST00000559222 GSTO2Q9H4Y5 243 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 ROPN1Q9HAT0 212 aaPredicted RBP17.65■□□□□ 0.42
CASC4-209ENST00000559222 PRDM7Q9NQW5 492 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 SEMA3GQ9NS98 782 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 SLC17A7Q9P2U7 560 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 TP53TG5Q9Y2B4 290 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 GCN1Q92616 2671 aaKnown RBP17.64■□□□□ 0.41
CASC4-209ENST00000559222 IGHV3-20A0A0C4DH32 117 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 MAGEB17A8MXT2 336 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 H0YIV9 168 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 SUPT7LO94864 414 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 OR4F21O95013 312 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 CLDN9O95484 217 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 HEXBP07686 556 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 CELA2AP08217 269 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 COX6A1P12074 109 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 HNRNPFP52597 415 aaKnown RBP17.64■□□□□ 0.41
CASC4-209ENST00000559222 RHAGQ02094 409 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 CLCQ05315 142 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 DCAF10Q5QP82 559 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 IQCKQ8N0W5 287 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 L3HYPDHQ96EM0 354 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 SEC16BQ96JE7 1060 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 CSF3RQ99062 836 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 NTMT1Q9BV86 223 aa17.64■□□□□ 0.41
CASC4-209ENST00000559222 ZNF71Q9NQZ8 489 aaPredicted RBP17.64■□□□□ 0.41
CASC4-209ENST00000559222 FARSBQ9NSD9 589 aaKnown RBP17.64■□□□□ 0.41
CASC4-209ENST00000559222 SMG1Q96Q15 3661 aaKnown RBP17.64■□□□□ 0.41
CASC4-209ENST00000559222 URADA6NGE7 173 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 UGDHO60701 494 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 B4GALT2O60909 372 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 MYL2P10916 166 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 IMPDH1P20839 514 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 BTG2P78543 158 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 PCLAFQ15004 111 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 KHDRBS2Q5VWX1 349 aaKnown RBP17.63■□□□□ 0.41
CASC4-209ENST00000559222 ARMC2Q8NEN0 867 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 FDCSPQ8NFU4 85 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 UBE2E3Q969T4 207 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 NUDT9Q9BW91 350 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 PRM3Q9NNZ6 103 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 MKS1Q9NXB0 559 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 GRID1Q9ULK0 1009 aa17.63■□□□□ 0.41
CASC4-209ENST00000559222 TGFBR3LH3BV60 316 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 PEX12O00623 359 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 PLPP1O14494 284 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 UBFD1O14562 309 aaKnown RBP17.62■□□□□ 0.41
CASC4-209ENST00000559222 CEACAM4O75871 244 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 FHP07954 510 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 ACPPP15309 386 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 PCOLCEQ15113 449 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 TUBB8Q3ZCM7 444 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 CCDC153Q494R4 210 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 SGO1Q5FBB7 561 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 TRIM40Q6P9F5 258 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 TMEM205Q6UW68 189 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 MED25Q71SY5 747 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 MILR1Q7Z6M3 343 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 TMEM102Q8N9M5 508 aaPredicted RBP17.62■□□□□ 0.41
CASC4-209ENST00000559222 CCDC63Q8NA47 563 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 FAM47BQ8NA70 645 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 C9orf43Q8TAL5 461 aaPredicted RBP17.62■□□□□ 0.41
CASC4-209ENST00000559222 TBC1D20Q96BZ9 403 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 HBEGFQ99075 208 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 ZNF717Q9BY31 904 aaPredicted RBP17.62■□□□□ 0.41
CASC4-209ENST00000559222 ADNPQ9H2P0 1102 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 ZNF160Q9HCG1 818 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 TNFRSF12AQ9NP84 129 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 PCDHGA11Q9Y5H2 935 aa17.62■□□□□ 0.41
CASC4-209ENST00000559222 BOD1L1Q8NFC6 3051 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 IGHV1-45A0A0A0MS14 117 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 IGHEP01854 428 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 RNH1P13489 461 aaKnown RBP17.61■□□□□ 0.41
CASC4-209ENST00000559222 MAOAP21397 527 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 ATP5A1P25705 553 aaKnown RBP17.61■□□□□ 0.41
CASC4-209ENST00000559222 PIK3CBP42338 1070 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 CCT5P48643 541 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 HTR6P50406 440 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 GGTA1PQ4G0N0 100 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 BEND6Q5SZJ8 279 aaPredicted RBP17.61■□□□□ 0.41
CASC4-209ENST00000559222 CEP85LQ5SZL2 805 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 DEPDC1Q5TB30 811 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 ANKRD37Q7Z713 158 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 SLC22A9Q8IVM8 553 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 C10orf107Q8IVU9 208 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 PARP9Q8IXQ6 854 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 ZNF843Q8N446 348 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 CCNYL1Q8N7R7 359 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 CDYL2Q8N8U2 506 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 LSM14AQ8ND56 463 aaKnown RBP17.61■□□□□ 0.41
CASC4-209ENST00000559222 PPP4R1Q8TF05 950 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 CMTM7Q96FZ5 175 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 FAR2Q96K12 515 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 IP6K3Q96PC2 410 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 FAM111AQ96PZ2 611 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 OR1F2PQ96R84 312 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 KCNA7Q96RP8 456 aa17.61■□□□□ 0.41
CASC4-209ENST00000559222 MECRQ9BV79 373 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms