RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 BTN3A2P78410 334 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 OC90Q02509 493 aaPredicted RBP12.67□□□□□ -0.38
VPS18-203ENST00000558855 C2orf54Q08AI8 447 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 DLG1Q12959 904 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 TGFBIQ15582 683 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 ABHD13Q7L211 337 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 RPS19BP1Q86WX3 136 aaKnown RBP12.67□□□□□ -0.38
VPS18-203ENST00000558855 SCUBE1Q8IWY4 988 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 NKAPQ8N5F7 415 aaKnown RBP12.67□□□□□ -0.38
VPS18-203ENST00000558855 CPSF7Q8N684 471 aaKnown RBP12.67□□□□□ -0.38
VPS18-203ENST00000558855 FAM47BQ8NA70 645 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 GABPB2Q8TAK5 448 aaPredicted RBP12.67□□□□□ -0.38
VPS18-203ENST00000558855 SUN3Q8TAQ9 357 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 THAP3Q8WTV1 239 aaPredicted RBP12.67□□□□□ -0.38
VPS18-203ENST00000558855 MS4A6EQ96DS6 147 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 GPR137Q96N19 417 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 AIF1LQ9BQI0 150 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 LIN28AQ9H9Z2 209 aaKnown RBP12.67□□□□□ -0.38
VPS18-203ENST00000558855 SAYSD1Q9NPB0 183 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 COPG2Q9UBF2 871 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 CTNNAL1Q9UBT7 734 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 TEKT2Q9UIF3 430 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 ZNF490Q9ULM2 529 aaPredicted RBP12.67□□□□□ -0.38
VPS18-203ENST00000558855 ENTPD4Q9Y227 616 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 ZNF835Q9Y2P0 537 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 PCDHGB6Q9Y5F9 930 aa12.67□□□□□ -0.38
VPS18-203ENST00000558855 TMEM200CA6NKL6 621 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 NPIPA5E9PKD4 350 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 NME2P1O60361 137 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 PRMT3O60678 531 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 SLC19A2O60779 497 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 SERPINA6P08185 405 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 RNH1P13489 461 aaKnown RBP12.66□□□□□ -0.38
VPS18-203ENST00000558855 CD1DP15813 335 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 IL10P22301 178 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 NME2P22392 152 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 PTGER1P34995 402 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 HSPA7P48741 367 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 AP2B1P63010 937 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 EFTUD2Q15029 972 aaKnown RBP eCLIP12.66□□□□□ -0.38
VPS18-203ENST00000558855 C3P1Q6ZMU1 363 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 MRGPRGQ86SM5 289 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 SLC5A8Q8N695 610 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 TRPV3Q8NET8 790 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 ADAMTS18Q8TE60 1221 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 DERL2Q9GZP9 239 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 GPAMQ9HCL2 828 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 PRDM9Q9NQV7 894 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 LRFN1Q9P244 771 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 NPIPA1Q9UND3 350 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 KCNE2Q9Y6J6 123 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 HCFC1P51610 2035 aa12.66□□□□□ -0.38
VPS18-203ENST00000558855 ADGRG4Q8IZF6 3080 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 TCRBV9S1A1TA0A576 114 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 LRIT2A6NDA9 550 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 PABPN1LA6NDY0 278 aaKnown RBP12.65□□□□□ -0.38
VPS18-203ENST00000558855 FAM159BA6NKW6 160 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 CCDC188H7C350 402 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 ADAM10O14672 748 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 ERI3O43414 337 aaKnown RBP12.65□□□□□ -0.38
VPS18-203ENST00000558855 SLC25A12O75746 678 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 MYO1DO94832 1006 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 CCDC166P0CW27 439 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 JAK1P23458 1154 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 CERS1P27544 350 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 TNFRSF8P28908 595 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 EEF1DP29692 281 aaKnown RBP12.65□□□□□ -0.38
VPS18-203ENST00000558855 GPR143P51810 404 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 ALDH6A1Q02252 535 aaKnown RBP12.65□□□□□ -0.38
VPS18-203ENST00000558855 ADPRMQ3LIE5 342 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 SLC25A25Q6KCM7 469 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 ZNF793Q6ZN11 406 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 Q6ZPB1 254 aaPredicted RBP12.65□□□□□ -0.38
VPS18-203ENST00000558855 FRA10AC1Q70Z53 315 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 MDGA2Q7Z553 956 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 UBE3DQ7Z6J8 389 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 CLNKQ7Z7G1 428 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 CMC1Q7Z7K0 106 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 ADAMTSL2Q86TH1 951 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 ARMC10Q8N2F6 343 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 RNF175Q8N4F7 328 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 ZNF321PQ8N8H1 164 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 ANKRD7Q92527 254 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 EXT2Q93063 718 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 GAL3ST3Q96A11 431 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 GPR22Q99680 433 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 RBBP8Q99708 897 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 POPDC3Q9HBV1 291 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 HRH3Q9Y5N1 445 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 ZNF407Q9C0G0 2248 aa12.65□□□□□ -0.38
VPS18-203ENST00000558855 A0A0G2JMM0 328 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 TRBV11-1A0A0K0K1C0 115 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 A0A1W2PPB8 328 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 A0A1W2PRS3 328 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 PINLYPA6NC86 204 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 KIR3DP1A8MWS1 328 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 CYR61O00622 381 aa12.64□□□□□ -0.39
VPS18-203ENST00000558855 ZNF354AO60765 605 aaPredicted RBP12.64□□□□□ -0.39
VPS18-203ENST00000558855 SNRPB2P08579 225 aaKnown RBP12.64□□□□□ -0.39
VPS18-203ENST00000558855 GGT5P36269 586 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms