RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 URGCPQ8TCY9 931 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 MAGED4Q96JG8 741 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 ZNF560Q96MR9 790 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 DUX3Q96PT4 197 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 F2RL3Q96RI0 385 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 NODALQ96S42 347 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 PKP2Q99959 881 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 FSD1Q9BTV5 496 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 ACPTQ9BZG2 426 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 WWTR1Q9GZV5 400 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 TRPV6Q9H1D0 765 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 MTIF3Q9H2K0 278 aaKnown RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 ZNF71Q9NQZ8 489 aaPredicted RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 ACOXLQ9NUZ1 547 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 PPP2R2CQ9Y2T4 447 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 STRAPQ9Y3F4 350 aaKnown RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 MTF2Q9Y483 593 aaPredicted RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 TEX264Q9Y6I9 313 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 TCF20Q9UGU0 1960 aaKnown RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 A0A087WZ39 114 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 hCG_38984A0A1B0GV85 526 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 IFITM10A6NMD0 228 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 ZNF732B4DXR9 585 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 ERVV-2B6SEH9 535 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 CHEK1O14757 476 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 CHUKO15111 745 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 SURF4O15260 269 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 ZNF432O94892 652 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 CT45A8P0DMV1 189 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 CT45A9P0DMV2 189 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 ARF4P18085 180 aaPredicted RBP3.87□□□□□ -1.79
CASC4-206ENST00000558847 AHCYP23526 432 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 ALDH3B1P43353 468 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 NUMBP49757 651 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 CCR4P51679 360 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 SLC12A3P55017 1021 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 PAX9P55771 341 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 CCZ1BP86790 482 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 CCZ1P86791 482 aaPredicted RBP3.87□□□□□ -1.79
CASC4-206ENST00000558847 GPR50Q13585 617 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 CDH18Q13634 790 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 TMEM132DQ14C87 1099 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 STX1AQ16623 288 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 ZNF876PQ49A33 203 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 CCDC40Q4G0X9 1142 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 CT45A2Q5DJT8 189 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 PLPP4Q5VZY2 271 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 OR4C11Q6IEV9 310 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 NR2C2APQ86WQ0 139 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 LACC1Q8IV20 430 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 RNASE8Q8TDE3 154 aaKnown RBP3.87□□□□□ -1.79
CASC4-206ENST00000558847 TMEM190Q8WZ59 177 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 BPIFA2Q96DR5 249 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 FBXO17Q96EF6 278 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 TMEM237Q96Q45 408 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 KRT12Q99456 494 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 HOXD1Q9GZZ0 328 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 SYTL2Q9HCH5 934 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.87□□□□□ -1.798e-6■■■□□ 18.7
CASC4-206ENST00000558847 KCNN3Q9UGI6 736 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 EXOC7Q9UPT5 735 aa3.87□□□□□ -1.79
CASC4-206ENST00000558847 RPH3AQ9Y2J0 694 aaPredicted RBP3.87□□□□□ -1.79
CASC4-206ENST00000558847 MRPS2Q9Y399 296 aaKnown RBP3.87□□□□□ -1.79
CASC4-206ENST00000558847 MYH14Q7Z406 1995 aaKnown RBP3.87□□□□□ -1.79
CASC4-206ENST00000558847 KRT87PA6NCN2 255 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 C15orf61A6NNL5 157 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 HHLA1C9JL84 531 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 RTCAO00442 366 aaKnown RBP3.86□□□□□ -1.79
CASC4-206ENST00000558847 PSMD3O43242 534 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 PRPSAP2O60256 369 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 CEACAM4O75871 244 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 CEACAM1P13688 526 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 ACKR3P25106 362 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 GIFP27352 417 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 MARCKSP29966 332 aaPredicted RBP3.86□□□□□ -1.79
CASC4-206ENST00000558847 ASMTP46597 345 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 TNFSF10P50591 281 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
CASC4-206ENST00000558847 SNRPD1P62314 119 aaKnown RBP3.86□□□□□ -1.79
CASC4-206ENST00000558847 CYCSP99999 105 aaKnown RBP3.86□□□□□ -1.79
CASC4-206ENST00000558847 CNTN1Q12860 1018 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 HNRNPDQ14103 355 aaKnown RBP3.86□□□□□ -1.79
CASC4-206ENST00000558847 GIT2Q14161 759 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 LRRC37A5PQ49AS3 106 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 FFAR4Q5NUL3 377 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 WLSQ5T9L3 541 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 C1orf189Q5VU69 101 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 C17orf107Q6ZR85 190 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 ZER1Q7Z7L7 766 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 NLRP14Q86W24 1093 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 C17orf64Q86WR6 236 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 HOGA1Q86XE5 327 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 ERC1Q8IUD2 1116 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 KDM8Q8N371 416 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 ZNF843Q8N446 348 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 DDHD1Q8NEL9 900 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 FAM76AQ8TAV0 307 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 KIAA1524Q8TCG1 905 aa3.86□□□□□ -1.79
CASC4-206ENST00000558847 SMAP2Q8WU79 429 aaPredicted RBP3.86□□□□□ -1.79
CASC4-206ENST00000558847 FAM46BQ96A09 425 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms