RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 HEMGNQ9BXL5 484 aa10.93□□□□□ -0.66
SMAD3-206ENST00000558739 YARS2Q9Y2Z4 477 aaKnown RBP10.93□□□□□ -0.66
SMAD3-206ENST00000558739 ATG4BQ9Y4P1 393 aa10.93□□□□□ -0.66
SMAD3-206ENST00000558739 KMT2CQ8NEZ4 4911 aaKnown RBP10.92□□□□□ -0.66
SMAD3-206ENST00000558739 TLX2O43763 284 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-206ENST00000558739 LCMT2O60294 686 aaKnown RBP10.92□□□□□ -0.66
SMAD3-206ENST00000558739 GALR3O60755 368 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-206ENST00000558739 CCNDBP1O95273 360 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 IL2RAP01589 272 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 H2AFZP0C0S5 128 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 CNR1P21554 472 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 SOX18P35713 384 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 ADARP55265 1226 aaKnown RBP10.92□□□□□ -0.66
SMAD3-206ENST00000558739 ATP5J2P56134 94 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 VEZF1Q14119 521 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 KCNJ11Q14654 390 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 SIX1Q15475 284 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-206ENST00000558739 ODF2Q5BJF6 829 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 CTSL3PQ5NE16 218 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 DCST1Q5T197 706 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 LRRC38Q5VT99 294 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 CAVIN1Q6NZI2 390 aaKnown RBP10.92□□□□□ -0.66
SMAD3-206ENST00000558739 H2AFVQ71UI9 128 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 OTOAQ7RTW8 1153 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 ASPGQ86U10 573 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 AFAP1L2Q8N4X5 818 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 MEIOBQ8N635 442 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 C9orf106Q8NAJ2 232 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 NEIL3Q8TAT5 605 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 SLC35G2Q8TBE7 412 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 ISL2Q96A47 359 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 PDLIM2Q96JY6 352 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 NAP1L5Q96NT1 182 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-206ENST00000558739 TSSK1BQ9BXA7 367 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 P2RY12Q9H244 342 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 KLHL28Q9NXS3 571 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 GALPQ9UBC7 116 aa10.92□□□□□ -0.66
SMAD3-206ENST00000558739 FEZ2Q9UHY8 353 aaPredicted RBP10.92□□□□□ -0.66
SMAD3-206ENST00000558739 KCNE1BA0A087WTH5 132 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 C15orf38-AP3S2A0A0A6YYH1 394 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 MACROD2A1Z1Q3 448 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 CTAGE15A4D2H0 777 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 C4orf51C9J302 202 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 PRMT5O14744 637 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 CTIFO43310 598 aaKnown RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 KIF5CO60282 957 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 NIPSNAP2O75323 286 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 LRATO95237 230 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 METTL18O95568 372 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 TP53P04637 393 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 SERPING1P05155 500 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 FPR1P21462 350 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 JAK1P23458 1154 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 LOXP28300 417 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 CPA2P48052 419 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 RPS15AP62244 130 aaKnown RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 CRYZQ08257 329 aaKnown RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 IQCB1Q15051 598 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 ANKRD20A4Q4UJ75 823 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 WIPI1Q5MNZ9 446 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 RNF187Q5TA31 235 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 THEMIS2Q5TEJ8 643 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 PRAMEF20Q5VT98 475 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 PTRHD1Q6GMV3 140 aaKnown RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 C20orf204Q6ZNR8 217 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 RTL4Q6ZR62 310 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 CTAGE6Q86UF2 777 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 ZNF321PQ8N8H1 164 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 OR4L1Q8NH43 312 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 SLC13A3Q8WWT9 602 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 VMP1Q96GC9 406 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 FOPNLQ96NB1 174 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 ALS2CR12Q96Q35 445 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 TRIB1Q96RU8 372 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 REG4Q9BYZ8 158 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 NAT10Q9H0A0 1025 aaKnown RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 RHBGQ9H310 441 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 PNO1Q9NRX1 252 aaKnown RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 DDX56Q9NY93 547 aaKnown RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 UTP6Q9NYH9 597 aaKnown RBP10.91□□□□□ -0.66
SMAD3-206ENST00000558739 MYOTQ9UBF9 498 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 CLDN16Q9Y5I7 305 aa10.91□□□□□ -0.66
SMAD3-206ENST00000558739 A8MV72 311 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-206ENST00000558739 CASKO14936 926 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 PSIP1O75475 530 aaKnown RBP10.9□□□□□ -0.66
SMAD3-206ENST00000558739 COMTP21964 271 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 IL10P22301 178 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 CTSSP25774 331 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 CCKARP32238 428 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 CPOXP36551 454 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 HK2P52789 917 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 ABATP80404 500 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 GBX1Q14549 363 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 ARHGAP19Q14CB8 494 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 ACSBG2Q5FVE4 666 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 NSUN5P2Q63ZY6 315 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 BBS12Q6ZW61 710 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 GPALPP1Q8IXQ4 340 aa10.9□□□□□ -0.66
SMAD3-206ENST00000558739 CAMKVQ8NCB2 501 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms