RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SLC44A3Q8N4M1 653 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 SCGB1C1Q8TD33 95 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 MUS81Q96NY9 551 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 NUSAP1Q9BXS6 441 aaKnown RBP13.5□□□□□ -0.25
SPG11-210ENST00000558319 OR51B5Q9H339 312 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 NPIPA1Q9UND3 350 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 B8ZZF3 427 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 WNT9AO14904 365 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 SLC22A2O15244 555 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 NUPL2O15504 423 aaKnown RBP13.5□□□□□ -0.25
SPG11-210ENST00000558319 CYP17A1P05093 508 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 ZNF35P13682 527 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 CHMP24386 653 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 GNRHRP30968 328 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 CDKN2CP42773 168 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 ASPAP45381 313 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 MVKQ03426 396 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 UBE2UQ5VVX9 321 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 WASH2PQ6VEQ5 465 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 STK35Q8TDR2 534 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 PAK1IP1Q9NWT1 392 aaPredicted RBP13.5□□□□□ -0.25
SPG11-210ENST00000558319 IGSF9Q9P2J2 1179 aa13.5□□□□□ -0.25
SPG11-210ENST00000558319 A0A0A6YYH2 397 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 TCRBV21S2A2A0A5A6 115 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 GLTPD2A6NH11 291 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 A6NJ64 397 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 DUSP11O75319 330 aaKnown RBP13.49□□□□□ -0.25
SPG11-210ENST00000558319 HMGN1P05114 100 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 F8A1P23610 371 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 PACRGLQ8N7B6 248 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 MR1Q95460 341 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 MMABQ96EY8 250 aaPredicted RBP13.49□□□□□ -0.25
SPG11-210ENST00000558319 TSSK6Q9BXA6 273 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 KCNS2Q9ULS6 477 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 CD8B2A6NJW9 211 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 SCDO00767 359 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 LATO43561 262 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 C8GP07360 202 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 CD8BP10966 210 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 ERP29P30040 261 aaKnown RBP13.49□□□□□ -0.25
SPG11-210ENST00000558319 DAOAP59103 153 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 ELP2Q6IA86 826 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 ERMP1Q7Z2K6 904 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 C1orf52Q8N6N3 182 aaKnown RBP13.49□□□□□ -0.25
SPG11-210ENST00000558319 ATG5Q9H1Y0 275 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 ZFR2Q9UPR6 939 aaKnown RBP13.49□□□□□ -0.25
SPG11-210ENST00000558319 M0R129 80 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 SRPRAP08240 638 aaKnown RBP13.49□□□□□ -0.25
SPG11-210ENST00000558319 ZNF709Q8N972 641 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 ACBD6Q9BR61 282 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 XPNPEP1Q9NQW7 623 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 TMEM184CQ9NVA4 438 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 H2AFB2P0C5Z0 115 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 JMJD7P0C870 316 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 AOC1P19801 751 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 ARL2P36404 184 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 ZNF181Q2M3W8 571 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 NKAPLQ5M9Q1 402 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 CERS6Q6ZMG9 384 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 IGFN1Q86VF2 1251 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 ZFAND2BQ8WV99 257 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 PHB2Q99623 299 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 PCDHGA11Q9Y5H2 935 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 PRORSD1PA6NEY8 169 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 C9J4A7 227 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 ANXA3P12429 323 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 BCKDHAP12694 445 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 MPIP34949 423 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 HERV-K104P61576 105 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 CTC1Q2NKJ3 1217 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 KANK2Q63ZY3 851 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 LRRC66Q68CR7 880 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 TCEAL3Q969E4 200 aa13.49□□□□□ -0.25
SPG11-210ENST00000558319 A8MT66 165 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 HTR1AP08908 422 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 HOXB2P14652 356 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 RAB4BP61018 213 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 ZNF45Q02386 682 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 KIAA1614Q5VZ46 1190 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 TXNRD3NBQ6F5E7 133 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 GRHL2Q6ISB3 625 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 SLC39A4Q6P5W5 647 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 CFAP77Q6ZQR2 320 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 FBXL18Q96ME1 805 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 ZBTB26Q9HCK0 441 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 ZDHHC18Q9NUE0 388 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 SCP2D1Q9UJQ7 156 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 IRS2Q9Y4H2 1338 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 HEXBP07686 556 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 FHP07954 510 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 RPS13P62277 151 aaKnown RBP13.48□□□□□ -0.25
SPG11-210ENST00000558319 C22orf42Q6IC83 251 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 CEACAM20Q6UY09 585 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 ESX1Q8N693 406 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 PLD4Q96BZ4 506 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 OR5B12Q96R08 314 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 SUV39H2Q9H5I1 410 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 FTSJ1Q9UET6 329 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 SETBP1Q9Y6X0 1596 aa13.48□□□□□ -0.25
SPG11-210ENST00000558319 C1orf196B1AJZ1 125 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms