RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 KLF13Q9Y2Y9 288 aaPredicted RBP14.89□□□□□ -0.03
SCFD1-224ENST00000557713 DYRK1BQ9Y463 629 aa14.89□□□□□ -0.03
SCFD1-224ENST00000557713 CELSR1Q9NYQ6 3014 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 A0A1B0GTH9 108 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 TFEBP19484 476 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 IVDP26440 423 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 PTGS2P35354 604 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 RFC3P40938 356 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 CLCN2P51788 898 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 GPR143P51810 404 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 RUNX2Q13950 521 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 TERF2Q15554 542 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 TESK1Q15569 626 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 BBS9Q3SYG4 887 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 CMPK2Q5EBM0 449 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 TOR1AIP1Q5JTV8 583 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 MDGA2Q7Z553 956 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 ZFP62Q8NB50 900 aaPredicted RBP14.88□□□□□ -0.03
SCFD1-224ENST00000557713 ARMC2Q8NEN0 867 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 CA5BP1Q8WTZ4 195 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 OSBPL9Q96SU4 736 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 PPANQ9NQ55 473 aaKnown RBP14.88□□□□□ -0.03
SCFD1-224ENST00000557713 ZNF223Q9UK11 482 aaPredicted RBP14.88□□□□□ -0.03
SCFD1-224ENST00000557713 PPT2Q9UMR5 302 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 MMACHCQ9Y4U1 282 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 CLDN16Q9Y5I7 305 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 KCNE2Q9Y6J6 123 aa14.88□□□□□ -0.03
SCFD1-224ENST00000557713 POLQO75417 2590 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 GTF3C1Q12789 2109 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 TRBV11-1A0A0K0K1C0 115 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 CDC7O00311 574 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 TFECO14948 347 aaPredicted RBP14.87□□□□□ -0.03
SCFD1-224ENST00000557713 HS6ST1O60243 411 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 ELK3P41970 407 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 BTN3A2P78410 334 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 TLE4Q04727 773 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 TRMT10BQ6PF06 316 aaKnown RBP14.87□□□□□ -0.03
SCFD1-224ENST00000557713 MEX3BQ6ZN04 569 aaKnown RBP14.87□□□□□ -0.03
SCFD1-224ENST00000557713 TMPRSS11BQ86T26 416 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 SCUBE1Q8IWY4 988 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 CYP4Z2PQ8N1L4 340 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 MARVELD2Q8N4S9 558 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 ANKRD7Q92527 254 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 SLCO2A1Q92959 643 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 PDLIM2Q96JY6 352 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 WDR83Q9BRX9 315 aaKnown RBP14.87□□□□□ -0.03
SCFD1-224ENST00000557713 MCCC2Q9HCC0 563 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 COQ3Q9NZJ6 369 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 ASIC3Q9UHC3 531 aa14.87□□□□□ -0.03
SCFD1-224ENST00000557713 HIVEP1P15822 2718 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 GOLGA6L10A0A0M3HER8 536 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 TGFBR3LH3BV60 316 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 ITGA10O75578 1167 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 MYO1DO94832 1006 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 TPOP07202 933 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 ZNF37AP17032 561 aaPredicted RBP14.86□□□□□ -0.03
SCFD1-224ENST00000557713 HSD17B7P56937 341 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 CDKL1Q00532 357 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 HP1BP3Q5SSJ5 553 aaPredicted RBP14.86□□□□□ -0.03
SCFD1-224ENST00000557713 STEAP4Q687X5 459 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 CD163Q86VB7 1156 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 TMEM156Q8N614 296 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 CHTF18Q8WVB6 975 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 VMP1Q96GC9 406 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 PWWP2AQ96N64 755 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 NPLQ9BXD5 320 aaPredicted RBP14.86□□□□□ -0.03
SCFD1-224ENST00000557713 DDX47Q9H0S4 455 aaKnown RBP14.86□□□□□ -0.03
SCFD1-224ENST00000557713 PNO1Q9NRX1 252 aaKnown RBP14.86□□□□□ -0.03
SCFD1-224ENST00000557713 FBXW2Q9UKT8 454 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 TEX264Q9Y6I9 313 aa14.86□□□□□ -0.03
SCFD1-224ENST00000557713 F8P00451 2351 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 LRIT2A6NDA9 550 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 NPEPPSL1A6NEC2 478 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 TMEM200CA6NKL6 621 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 CES2O00748 559 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 PRKNO60260 465 aaPredicted RBP14.85□□□□□ -0.03
SCFD1-224ENST00000557713 C1GALT1C1LP0DN25 315 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 IGFBP2P18065 325 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 PPP2R1BP30154 601 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 HNRNPH1P31943 449 aaKnown RBP14.85□□□□□ -0.03
SCFD1-224ENST00000557713 HNMTP50135 292 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 NR0B1P51843 470 aaKnown RBP14.85□□□□□ -0.03
SCFD1-224ENST00000557713 HNRNPFP52597 415 aaKnown RBP14.85□□□□□ -0.03
SCFD1-224ENST00000557713 GPR85P60893 370 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 STXBP1P61764 594 aaKnown RBP14.85□□□□□ -0.03
SCFD1-224ENST00000557713 FRG1Q14331 258 aaKnown RBP14.85□□□□□ -0.03
SCFD1-224ENST00000557713 EMC4Q5J8M3 183 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 TMEM211Q6ICI0 200 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 SLCO4C1Q6ZQN7 724 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 CEP128Q6ZU80 1094 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 KLHDC8AQ8IYD2 350 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 PDIK1LQ8N165 341 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 SLC35F6Q8N357 371 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 NKAPQ8N5F7 415 aaKnown RBP14.85□□□□□ -0.03
SCFD1-224ENST00000557713 TMEM52Q8NDY8 209 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 OR52N2Q8NGI0 321 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 NCLNQ969V3 563 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 GAL3ST3Q96A11 431 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 MS4A6EQ96DS6 147 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms