RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 LYSMD4Q5XG99 296 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 FCRL6Q6DN72 434 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 FBXO42Q6P3S6 717 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 OGFOD3Q6PK18 319 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 C17orf82Q86X59 251 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-233ENST00000557529 TICAM1Q8IUC6 712 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 SFTPA2Q8IWL1 248 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 CLECL1Q8IZS7 167 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 PQLC1Q8N2U9 271 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 ZCCHC7Q8N3Z6 543 aaKnown RBP11.89□□□□□ -0.51
SHMT2-233ENST00000557529 TRIML2Q8N7C3 387 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 FAM47BQ8NA70 645 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 OR10A6Q8NH74 314 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 GOT1L1Q8NHS2 421 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-233ENST00000557529 BAHD1Q8TBE0 780 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-233ENST00000557529 POP5Q969H6 163 aaKnown RBP11.89□□□□□ -0.51
SHMT2-233ENST00000557529 GAL3ST3Q96A11 431 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 NSMCE2Q96MF7 247 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 C17orf62Q9BQA9 187 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 FAIM2Q9BWQ8 316 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 SLC6A13Q9NSD5 602 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 SUSD2Q9UGT4 822 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 POMT2Q9UKY4 750 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 AP4S1Q9Y587 144 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 ARHGEF17Q96PE2 2063 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-233ENST00000557529 HEATR5BQ9P2D3 2071 aa11.89□□□□□ -0.51
SHMT2-233ENST00000557529 PRUNE2Q8WUY3 3088 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 EYSQ5T1H1 3165 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 DHRS12A0PJE2 317 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 ELOVL7A1L3X0 281 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 URADA6NGE7 173 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 CLIC1O00299 241 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 TMPRSS11DO60235 418 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 NOBOXO60393 691 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 UBXN7O94888 489 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 SCELO95171 688 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 B3GALT4O96024 378 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 FAM58BPP0C7Q3 252 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 TDGF1P13385 188 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 HOXB3P14651 431 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 ENGP17813 658 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 GGT1P19440 569 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 IL10P22301 178 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 HIST1H1TP22492 207 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 PSMA4P25789 261 aaKnown RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 MC1RQ01726 317 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 GLYATQ6IB77 296 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 TSSK4Q6SA08 328 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 VN1R4Q7Z5H5 301 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 SERPINA11Q86U17 422 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 CALHM3Q86XJ0 350 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 SPPL2CQ8IUH8 684 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 MICU2Q8IYU8 434 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 ZNF655Q8N720 491 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 CAMKVQ8NCB2 501 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 OR4A15Q8NGL6 344 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 NRG4Q8WWG1 115 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 RERGQ96A58 199 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 TM4SF19Q96DZ7 209 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 AURKBQ96GD4 344 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 REXO5Q96IC2 774 aaKnown RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 TEFMQ96QE5 360 aaKnown RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 OR2A5Q96R48 311 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 ZFYVE21Q9BQ24 234 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 TACO1Q9BSH4 297 aaKnown RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 SPATA9Q9BWV2 254 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 AICDAQ9GZX7 198 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 ABCG4Q9H172 646 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 SEMA6CQ9H3T2 930 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 KLHL31Q9H511 634 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 IKZF5Q9H5V7 419 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 PIF1Q9H611 641 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 COPS7BQ9H9Q2 264 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 PRDM7Q9NQW5 492 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 LYARQ9NX58 379 aaKnown RBP11.88□□□□□ -0.51
SHMT2-233ENST00000557529 EHD3Q9NZN3 535 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 PILRAQ9UKJ1 303 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 CSNK1G3Q9Y6M4 447 aa11.88□□□□□ -0.51
SHMT2-233ENST00000557529 A0A1B0GVT2 93 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 A0A1W2PRB8 838 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 CASQ2O14958 399 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-233ENST00000557529 PPM1DO15297 605 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 CTSVO60911 334 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 GPX2P18283 190 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 ATP5A1P25705 553 aaKnown RBP11.87□□□□□ -0.51
SHMT2-233ENST00000557529 CTSKP43235 329 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 ALDH9A1P49189 494 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 DHPSP49366 369 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-233ENST00000557529 POLE2P56282 527 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 SLAMF1Q13291 335 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 MUM1Q2TAK8 710 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 C14orf28Q4W4Y0 310 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 MANEAQ5SRI9 462 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 PMS2CLQ68D20 193 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 ERICH5Q6P6B1 374 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 ZNF793Q6ZN11 406 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 RNF111Q6ZNA4 994 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 RNF44Q7L0R7 432 aa11.87□□□□□ -0.51
SHMT2-233ENST00000557529 ZNF761Q86XN6 746 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-233ENST00000557529 DTWD1Q8N5C7 304 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms