RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 FAM90A27PA6NNH2 459 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 GABRR3A8MPY1 467 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 F8W8V4 182 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 GOLGA6L22H0YM25 854 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 PRRG2O14669 202 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 P2RX6O15547 441 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 VPS26AO75436 327 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 NEURL1O76050 574 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 METTL18O95568 372 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 DHRS4L1P0CG22 281 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 NEFHP12036 1026 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 DRD2P14416 443 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 ZNF24P17028 368 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 KLK2P20151 261 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 TNFSF4P23510 183 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CTNNA2P26232 953 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CMPK1P30085 196 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 PTGER1P34995 402 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 IST1P53990 364 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CLNS1AP54105 237 aaKnown RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 HADHBP55084 474 aaKnown RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 TPM4P67936 248 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 NAA25Q14CX7 972 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 TMED2Q15363 201 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CCNG2Q16589 344 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 PARP6Q2NL67 630 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 MFSD4BQ5TF39 518 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 LRRC8BQ6P9F7 803 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 TTC23LQ6PF05 361 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 LRFN4Q6PJG9 635 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 Q6ZS46 218 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 SYDE1Q6ZW31 735 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 ZNF534Q76KX8 674 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 GALNTL5Q7Z4T8 443 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CPEB2Q7Z5Q1 589 aaKnown RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 LDB1Q86U70 411 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 PAQR7Q86WK9 346 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 TGIF2LYQ8IUE0 185 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 LMNTD2Q8IXW0 634 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 EID3Q8N140 333 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 RAB42Q8N4Z0 105 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CPSF7Q8N684 471 aaKnown RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 DNAAF3Q8N9W5 541 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 FAM71DQ8N9W8 422 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 TMEM178AQ8NBL3 297 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 OR4L1Q8NH43 312 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 PPP1R35Q8TAP8 253 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 METTL21AQ8WXB1 218 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 RAD51AP1Q96B01 352 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 ARL8AQ96BM9 186 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 RSRC1Q96IZ7 334 aaKnown RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 ZNF354BQ96LW1 612 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CCDC42Q96M95 316 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CCDC140Q96MF4 163 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 ZNF778Q96MU6 729 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 OR2A5Q96R48 311 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CYTH2Q99418 400 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 FOXC2Q99958 501 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 ZNF559Q9BR84 538 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CARD6Q9BX69 1037 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 TSSK1BQ9BXA7 367 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 UCK2Q9BZX2 261 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 CXXC4Q9H2H0 198 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 GSX1Q9H4S2 264 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 KCNK13Q9HB14 408 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 MRPS30Q9NP92 439 aaKnown RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 ABHD10Q9NUJ1 306 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 ZNHIT6Q9NWK9 470 aaKnown RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 COQ3Q9NZJ6 369 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 GNPTGQ9UJJ9 305 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 ADAM30Q9UKF2 790 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 INTS1Q8N201 2190 aaKnown RBP5.5□□□□□ -1.53
VPS33B-207ENST00000557470 GTF3C1Q12789 2109 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 SCN2AQ99250 2005 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 SYNDIG1LA6NDD5 238 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 TMEM200CA6NKL6 621 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 FOXO6A8MYZ6 492 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 EIF3FO00303 357 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 PRMT5O14744 637 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 HAT1O14929 419 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 NME2P1O60361 137 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 PHF2O75151 1096 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 H2AFYO75367 372 aaKnown RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 SLC25A12O75746 678 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 FAM155BO75949 473 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 TOXO94900 526 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 SUN1O94901 812 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 STATHP02808 62 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 CSTBP04080 98 aaKnown RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 SP1P08047 785 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 GSTP1P09211 210 aaKnown RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 ERGP11308 486 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 EZRP15311 586 aaKnown RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 PEX2P28328 305 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 PTPN7P35236 360 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 PIK3CBP42338 1070 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 XCR1P46094 333 aa5.49□□□□□ -1.53
VPS33B-207ENST00000557470 NAP1L1P55209 391 aaKnown RBP5.49□□□□□ -1.53
VPS33B-207ENST00000557470 GFRA1P56159 465 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms