RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 ZBTB14O43829 449 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 KERAO60938 352 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 NIPSNAP2O75323 286 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 SLCO2B1O94956 709 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 ESR1P03372 595 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 DRD2P14416 443 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 UGT2B7P16662 529 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 RPS3P23396 243 aaKnown RBP eCLIP11.89□□□□□ -0.516e-7■■□□□ 13.8
SHMT2-230ENST00000557427 ADSLP30566 484 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-230ENST00000557427 MNAT1P51948 309 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 NAA20P61599 178 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 ADORA2A-AS1P86434 159 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 Q0VFX4 171 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 SSPNQ14714 243 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 ZNF169Q14929 603 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-230ENST00000557427 DNAL1Q4LDG9 190 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 SLC9B1Q4ZJI4 515 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 UGT3A1Q6NUS8 523 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 SPESP1Q6UW49 350 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 FRMD7Q6ZUT3 714 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 ACAD11Q709F0 780 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 CARFQ8N187 725 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 FAM13CQ8NE31 585 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 OR1L3Q8NH93 324 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 KIAA1191Q96A73 305 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 BIRC8Q96P09 236 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 IL17FQ96PD4 163 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 OR2A14Q96R47 310 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 ATOH8Q96SQ7 321 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 FANCEQ9HB96 536 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 SERTAD3Q9UJW9 196 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 BTRCQ9Y297 605 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 KLHL20Q9Y2M5 609 aa11.89□□□□□ -0.51
SHMT2-230ENST00000557427 MAP1AP78559 2803 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-230ENST00000557427 B2RBV5 119 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 KPNA5O15131 536 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 KDM1AO60341 852 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 HERVK_113P63132 956 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 ZIC1Q15915 447 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 ZNF678Q5SXM1 525 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 B3GNTL1Q67FW5 361 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-230ENST00000557427 TTC23LQ6PF05 361 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 PAQR3Q6TCH7 311 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 RPTNQ6XPR3 784 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 PPP1R32Q7Z5V6 425 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 SPNS2Q8IVW8 549 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 CPSF7Q8N684 471 aaKnown RBP11.88□□□□□ -0.51
SHMT2-230ENST00000557427 CATSPER1Q8NEC5 780 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 STAG3L4Q8TBR4 150 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 N4BP2L2Q92802 583 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-230ENST00000557427 KCNJ9Q92806 393 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 MAELQ96JY0 434 aaKnown RBP11.88□□□□□ -0.51
SHMT2-230ENST00000557427 IP6K3Q96PC2 410 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 TAAR6Q96RI8 345 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 GPR21Q99679 349 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 MDFIQ99750 246 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 ERVK-6Q9BXR3 956 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 SLC7A5P2Q9GIP4 190 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 SPRTNQ9H040 489 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-230ENST00000557427 GSTO2Q9H4Y5 243 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 FAM60AQ9NP50 221 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 SEMA3GQ9NS98 782 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 MRGBPQ9NV56 204 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 OR6C2Q9NZP2 312 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 SUCOQ9UBS9 1254 aaKnown RBP11.88□□□□□ -0.51
SHMT2-230ENST00000557427 BAIAP2L1Q9UHR4 511 aa11.88□□□□□ -0.51
SHMT2-230ENST00000557427 TRMT6Q9UJA5 497 aaKnown RBP11.88□□□□□ -0.51
SHMT2-230ENST00000557427 NCOA6Q14686 2063 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-230ENST00000557427 GOLGA8QA0A0J9YX86 632 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 GOLGA8OA6NCC3 632 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 KRT87PA6NCN2 255 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 SYCE1LA8MT33 242 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 A8MUI8 341 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 E5RI56 91 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 GOLGA8NF8WBI6 632 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 H3BMM5 538 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 KLK8O60259 260 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 KLHL41O60662 606 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 CNOT3O75175 753 aaKnown RBP11.87□□□□□ -0.51
SHMT2-230ENST00000557427 ALOX12BO75342 701 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 RPN2P04844 631 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 CYP2A7P20853 494 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 CCND1P24385 295 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 PEBP1P30086 187 aaKnown RBP11.87□□□□□ -0.51
SHMT2-230ENST00000557427 BDKRB1P46663 353 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 KCNC1P48547 511 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 RAB28P51157 221 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 SRSF11Q05519 484 aaKnown RBP11.87□□□□□ -0.51
SHMT2-230ENST00000557427 GRB7Q14451 532 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 NAA25Q14CX7 972 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 OR4D1Q15615 310 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 LSM12Q3MHD2 195 aaKnown RBP11.87□□□□□ -0.51
SHMT2-230ENST00000557427 CCSMST1Q4G0I0 132 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 UNC50Q53HI1 259 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 SH2D4BQ5SQS7 431 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 XKRXQ6PP77 449 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 FAM180AQ6UWF9 173 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 UNC5DQ6UXZ4 953 aa11.87□□□□□ -0.51
SHMT2-230ENST00000557427 BCORP1Q8N888 145 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms