RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CDH1P12830 882 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 PEX19P40855 299 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 NPY2RP49146 381 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 CUL1Q13616 776 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 HYAL4Q2M3T9 481 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 MRNIPQ6NTE8 343 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 IL20RBQ6UXL0 311 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 SLC22A16Q86VW1 577 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 TC2NQ8N9U0 490 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 NAXEQ8NCW5 288 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 UTP15Q8TED0 518 aaKnown RBP11.63□□□□□ -0.55
PSEN1-221ENST00000557293 RNASE6Q93091 150 aaKnown RBP11.63□□□□□ -0.55
PSEN1-221ENST00000557293 COX4I2Q96KJ9 171 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 SGPP1Q9BX95 441 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 AICDAQ9GZX7 198 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 LACRTQ9GZZ8 138 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 NEUROD4Q9HD90 331 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 KLHL42Q9P2K6 505 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 SPRR3Q9UBC9 169 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 ACAD8Q9UKU7 415 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 DRG1Q9Y295 367 aaKnown RBP11.63□□□□□ -0.55
PSEN1-221ENST00000557293 VPS9D1Q9Y2B5 631 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 DHRS7Q9Y394 339 aa11.63□□□□□ -0.55
PSEN1-221ENST00000557293 AKR1B15C9JRZ8 316 aaPredicted RBP11.62□□□□□ -0.55
PSEN1-221ENST00000557293 E7EVH7 732 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 LIASO43766 372 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 CEP104O60308 925 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 OR2J2O76002 312 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 MYO1DO94832 1006 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 IFNB1P01574 187 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 TPM3P06753 285 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 SLC35G6P0C7Q6 338 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 ZSCAN5DPP0CG00 497 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 ZNF888P0CJ79 500 aaPredicted RBP11.62□□□□□ -0.55
PSEN1-221ENST00000557293 EPXP11678 715 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 PCSK6P29122 969 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 PPP2R1BP30154 601 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 CEACAM8P31997 349 aaPredicted RBP11.62□□□□□ -0.55
PSEN1-221ENST00000557293 RPL22P35268 128 aaKnown RBP11.62□□□□□ -0.55
PSEN1-221ENST00000557293 SOX3P41225 446 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 DCAF7P61962 342 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 NAE1Q13564 534 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 PWP1Q13610 501 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 SLC10A1Q14973 349 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 NDUFAF5Q5TEU4 345 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 SHEQ5VZ18 495 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 AGTRAPQ6RW13 159 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 LCTLQ6UWM7 567 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 MBOAT1Q6ZNC8 495 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 UBE2R2Q712K3 238 aaPredicted RBP11.62□□□□□ -0.55
PSEN1-221ENST00000557293 C17orf64Q86WR6 236 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 CNGA4Q8IV77 575 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 FAM109AQ8N4B1 249 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 ABHD11Q8NFV4 315 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 LINC01560Q8TB33 94 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 NT5CQ8TCD5 201 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 NCLNQ969V3 563 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 IL22Q9GZX6 179 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 ATG10Q9H0Y0 220 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 SPNS1Q9H2V7 528 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 KLHL31Q9H511 634 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 ZNF395Q9H8N7 513 aaPredicted RBP11.62□□□□□ -0.55
PSEN1-221ENST00000557293 CLK4Q9HAZ1 481 aaKnown RBP11.62□□□□□ -0.55
PSEN1-221ENST00000557293 IL1RL2Q9HB29 575 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 ALKBH4Q9NXW9 302 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 B4GALT7Q9UBV7 327 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 ADAMTS6Q9UKP5 1117 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 PACSIN2Q9UNF0 486 aaPredicted RBP11.62□□□□□ -0.55
PSEN1-221ENST00000557293 ERVK-11Q9UQG0 969 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 PDE10AQ9Y233 779 aa11.62□□□□□ -0.55
PSEN1-221ENST00000557293 REXO2Q9Y3B8 237 aaKnown RBP11.62□□□□□ -0.55
PSEN1-221ENST00000557293 ARHGAP21Q5T5U3 1957 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 ATP6AP2A0A1C7CYW4 349 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 A8MVJ9 347 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 E5RI56 91 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 ACOT7O00154 380 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 NDUFS4O43181 175 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 OR1F1O43749 312 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 ATP6AP2O75787 350 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 ZFAND5O76080 213 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 TPM1P09493 284 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 OGNP20774 298 aaKnown RBP11.61□□□□□ -0.55
PSEN1-221ENST00000557293 TACR1P25103 407 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 MGAT1P26572 445 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 DNASE1L1P49184 302 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 MAN2A2P49641 1150 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 ASCL1P50553 236 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 TIAL1Q01085 375 aaKnown RBP eCLIP11.61□□□□□ -0.55
PSEN1-221ENST00000557293 TERF2Q15554 542 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 WLSQ5T9L3 541 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 RNF187Q5TA31 235 aaPredicted RBP11.61□□□□□ -0.55
PSEN1-221ENST00000557293 PIWIL4Q7Z3Z4 852 aaKnown RBP11.61□□□□□ -0.55
PSEN1-221ENST00000557293 CILP2Q8IUL8 1156 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 SCUBE1Q8IWY4 988 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 GPALPP1Q8IXQ4 340 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 CA13Q8N1Q1 262 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 OTUD6BQ8N6M0 293 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 TNIP2Q8NFZ5 429 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 VMP1Q96GC9 406 aa11.61□□□□□ -0.55
PSEN1-221ENST00000557293 PDLIM2Q96JY6 352 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms