RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 FANCGO15287 622 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 SLC16A5O15375 505 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 TMPRSS2O15393 492 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 NEURL1O76050 574 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 TSPAN12O95859 305 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 SYF2O95926 243 aaKnown RBP8.13□□□□□ -1.11
VRK1-206ENST00000557222 WNT11O96014 354 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 C8GP07360 202 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 TRHRP34981 398 aaPredicted RBP8.13□□□□□ -1.11
VRK1-206ENST00000557222 KIR3DL1P43629 444 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 CSNK1G2P78368 415 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 PMP22Q01453 160 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 SP140Q13342 867 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 PWP1Q13610 501 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 THOC5Q13769 683 aaKnown RBP8.13□□□□□ -1.11
VRK1-206ENST00000557222 USP10Q14694 798 aaKnown RBP8.13□□□□□ -1.11
VRK1-206ENST00000557222 NSDHLQ15738 373 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 MSMPQ1L6U9 139 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 KRTAP21-3Q3LHN1 58 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 SFT2D3Q587I9 215 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 MFSD4BQ5TF39 518 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 SPINK14Q6IE38 97 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 UGT3A1Q6NUS8 523 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 PAPD4Q6PIY7 484 aaKnown RBP8.13□□□□□ -1.11
VRK1-206ENST00000557222 CES3Q6UWW8 571 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 SEZ6L2Q6UXD5 910 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 UBE2R2Q712K3 238 aaPredicted RBP8.13□□□□□ -1.11
VRK1-206ENST00000557222 STRA8Q7Z7C7 330 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 ASPGQ86U10 573 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 C17orf64Q86WR6 236 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 RPS19BP1Q86WX3 136 aaKnown RBP8.13□□□□□ -1.11
VRK1-206ENST00000557222 PLD3Q8IV08 490 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 AFAP1L2Q8N4X5 818 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 GPATCH11Q8N954 259 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 PPFIBP2Q8ND30 876 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 MCUQ8NE86 351 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 CALML6Q8TD86 181 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 ELP5Q8TE02 316 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 CHTF18Q8WVB6 975 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 SLC13A3Q8WWT9 602 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 DMRTA2Q96SC8 542 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 NPAS2Q99743 824 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 TRIM51Q9BSJ1 452 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 HAUS8Q9BT25 410 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 MCCC2Q9HCC0 563 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 LANCL2Q9NS86 450 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 LRFN1Q9P244 771 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 SH3BGRL2Q9UJC5 107 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 MED16Q9Y2X0 877 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 NAV3Q8IVL0 2385 aa8.13□□□□□ -1.11
VRK1-206ENST00000557222 FOXO6A8MYZ6 492 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 NPIPA5E9PKD4 350 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 FAM227AF5H4B4 570 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 SGK494L7N484 410 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 NDC80O14777 642 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 NME2P1O60361 137 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 WISP2O76076 250 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 FHP07954 510 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 SNRPB2P08579 225 aaKnown RBP8.12□□□□□ -1.11
VRK1-206ENST00000557222 SLC35G6P0C7Q6 338 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 ABOP16442 354 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 ZNF24P17028 368 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 IL1RNP18510 177 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 NME2P22392 152 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 JAK1P23458 1154 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 CYB561P49447 251 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 RGS4P49798 205 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 OR4D2P58180 307 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 SLC26A5P58743 744 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 OC90Q02509 493 aaPredicted RBP8.12□□□□□ -1.11
VRK1-206ENST00000557222 DHX34Q14147 1143 aaKnown RBP8.12□□□□□ -1.11
VRK1-206ENST00000557222 ABRAXAS2Q15018 415 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 FCRLBQ6BAA4 426 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 ZNF470Q6ECI4 717 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 TMEM211Q6ICI0 200 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 CAPN13Q6MZZ7 669 aaPredicted RBP8.12□□□□□ -1.11
VRK1-206ENST00000557222 CASC4Q6P4E1 433 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 ZNF549Q6P9A3 640 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 LCTLQ6UWM7 567 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 ZNF662Q6ZS27 426 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 PRSS41Q7RTY9 318 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 GALNTL5Q7Z4T8 443 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.12□□□□□ -1.11
VRK1-206ENST00000557222 SLC26A11Q86WA9 606 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 DOLPP1Q86YN1 238 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 CEP97Q8IW35 865 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 CHERPQ8IWX8 916 aaKnown RBP8.12□□□□□ -1.11
VRK1-206ENST00000557222 PALM2Q8IXS6 379 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 TBC1D19Q8N5T2 526 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 MFSD9Q8NBP5 474 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 ABHD11Q8NFV4 315 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 OR4K1Q8NGD4 311 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 GABPB2Q8TAK5 448 aaPredicted RBP8.12□□□□□ -1.11
VRK1-206ENST00000557222 CD200R1Q8TD46 325 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 STK35Q8TDR2 534 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 AGAP11Q8TF27 550 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 TMEM125Q96AQ2 219 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 TBC1D20Q96BZ9 403 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 FAM136AQ96C01 138 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 DESI2Q9BSY9 194 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms