RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 COILP38432 576 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-220ENST00000557037 PNLIPRP1P54315 467 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 ABATP80404 500 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 MEF2AQ02078 507 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-220ENST00000557037 TFDP2Q14188 446 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 SEMA3AQ14563 771 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 ANKRD20A4Q4UJ75 823 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 PDLIM3Q53GG5 364 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-220ENST00000557037 ANKRD20A2Q5SQ80 823 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 THEMIS2Q5TEJ8 643 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 ANKRD20A1Q5TYW2 823 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 HECTD2Q5U5R9 776 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 ANKRD20A3Q5VUR7 823 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 LDB1Q86U70 411 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-220ENST00000557037 ZNF441Q8N8Z8 693 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 C9orf106Q8NAJ2 232 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 CAMKVQ8NCB2 501 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 TTC1Q99614 292 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 EBNA1BP2Q99848 306 aaKnown RBP11.5□□□□□ -0.57
PSEN1-220ENST00000557037 SGPP1Q9BX95 441 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 RHBGQ9H310 441 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 ZNF703Q9H7S9 590 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-220ENST00000557037 ARNT2Q9HBZ2 717 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 SH2D2AQ9NP31 389 aa11.5□□□□□ -0.57
PSEN1-220ENST00000557037 FEZ2Q9UHY8 353 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-220ENST00000557037 IGKV3D-11A0A0A0MRZ8 115 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 LRRC10BA6NIK2 292 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 H7C0C1 242 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 GOT2P00505 430 aaKnown RBP11.49□□□□□ -0.57
PSEN1-220ENST00000557037 CRYGSP22914 178 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 PPP2R1BP30154 601 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 CDKN2BP42772 138 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 ATP5OP48047 213 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 RPS15AP62244 130 aaKnown RBP11.49□□□□□ -0.57
PSEN1-220ENST00000557037 OCRLQ01968 901 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 CRYZQ08257 329 aaKnown RBP11.49□□□□□ -0.57
PSEN1-220ENST00000557037 DEFB134Q4QY38 66 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 C6orf52Q5T4I8 152 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 UBAP2Q5T6F2 1119 aaKnown RBP11.49□□□□□ -0.57
PSEN1-220ENST00000557037 PTRHD1Q6GMV3 140 aaKnown RBP11.49□□□□□ -0.57
PSEN1-220ENST00000557037 ALKBH5Q6P6C2 394 aaKnown RBP11.49□□□□□ -0.57
PSEN1-220ENST00000557037 PLXDC2Q6UX71 529 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 QSOX2Q6ZRP7 698 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 BTLAQ7Z6A9 289 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 ASPGQ86U10 573 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 SLC22A8Q8TCC7 542 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 PKP4Q99569 1192 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 TIMP4Q99727 224 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 ADAM19Q9H013 955 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 ZFATQ9P243 1243 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 UVRAGQ9P2Y5 699 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 MYOTQ9UBF9 498 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 ALPK2Q86TB3 2170 aa11.49□□□□□ -0.57
PSEN1-220ENST00000557037 KCNE1BA0A087WTH5 132 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 MBD3L3A6NE82 208 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-220ENST00000557037 MROH6A6NGR9 719 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 HACD1B0YJ81 288 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 MYO1CO00159 1063 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 GALR3O60755 368 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-220ENST00000557037 ZNF354AO60765 605 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-220ENST00000557037 EGR1P18146 543 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 MC3RP41968 323 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 FAM27E3Q08E93 113 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 DUSP8Q13202 625 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 C12orf54Q6X4T0 127 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 OTOAQ7RTW8 1153 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 MBD3L2Q8NHZ7 208 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-220ENST00000557037 SLC13A3Q8WWT9 602 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 TM4SF19Q96DZ7 209 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 ZC3HAV1LQ96H79 300 aaKnown RBP11.48□□□□□ -0.57
PSEN1-220ENST00000557037 PDLIM2Q96JY6 352 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 JSRP1Q96MG2 331 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-220ENST00000557037 SLC30A3Q99726 388 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 MED18Q9BUE0 208 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 PACSIN1Q9BY11 444 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 RBSNQ9H1K0 784 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 ACKR4Q9NPB9 350 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 PRDM9Q9NQV7 894 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 ZNF226Q9NYT6 803 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 SLC2A6Q9UGQ3 507 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 HYOU1Q9Y4L1 999 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 SLC22A7Q9Y694 548 aa11.48□□□□□ -0.57
PSEN1-220ENST00000557037 LRRC3CA6NJW4 275 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 CD8B2A6NJW9 211 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 E7ENX8 843 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 LCMT2O60294 686 aaKnown RBP11.47□□□□□ -0.57
PSEN1-220ENST00000557037 LOXP28300 417 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-220ENST00000557037 THBS2P35442 1172 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 GPR143P51810 404 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 KCNJ2P63252 427 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 TAP2Q03519 686 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 ARHGAP19Q14CB8 494 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 HERC3Q15034 1050 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 ZNF534Q76KX8 674 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 RASGEF1CQ8N431 466 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 AFAP1L2Q8N4X5 818 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 PPM1NQ8N819 430 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 GOLM1Q8NBJ4 401 aa11.47□□□□□ -0.57
PSEN1-220ENST00000557037 ZNF740Q8NDX6 193 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms