RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 C8AP07357 584 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TGM1P22735 817 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PTGER3P43115 390 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 NR4A2P43354 598 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 RNF144AP50876 292 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 MED21Q13503 144 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 XKR7Q5GH72 579 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 LPCAT4Q643R3 524 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 REP15Q6BDI9 236 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ASTLQ6HA08 431 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 FAM151BQ6UXP7 276 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 IZUMO2Q6UXV1 221 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PTCHD4Q6ZW05 846 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 EFL1Q7Z2Z2 1120 aaKnown RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TSPAN33Q86UF1 283 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ADGRG5Q8IZF4 528 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TAGAPQ8N103 731 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 FBXO39Q8N4B4 442 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 FIBINQ8TAL6 211 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SLC22A17Q8WUG5 538 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 CLP1Q92989 425 aaKnown RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 LRCH3Q96II8 777 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 RPL10LQ96L21 214 aaKnown RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PFDN5Q99471 154 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SLC26A1Q9H2B4 701 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 EFCAB1Q9HAE3 211 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 IL26Q9NPH9 171 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ABCB8Q9NUT2 735 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 KIAA1549LQ6ZVL6 1849 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 A0A1B0GV90 55 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 BTBD17A6NE02 478 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 PRORSD1PA6NEY8 169 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 NPIPB15A6NHN6 443 aaPredicted RBP4.9□□□□□ -1.62
TMEM260-210ENST00000556422 AGAP14A8MT82 685 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 HIDE1A8MVS5 230 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 FXYD1O00168 92 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 LEFTY2O00292 366 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 STX16O14662 325 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 KIAA0355O15063 1070 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 OR6B1O95007 311 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 SPDEFO95238 335 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 ESR1P03372 595 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 RPL5P46777 297 aaKnown RBP4.9□□□□□ -1.62
TMEM260-210ENST00000556422 CAMLGP49069 296 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 PRRX1P54821 245 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 ERVFC1P60507 584 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 HTD2P86397 168 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 MYBPC1Q00872 1141 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 FLI1Q01543 452 aaPredicted RBP4.9□□□□□ -1.62
TMEM260-210ENST00000556422 CACNG1Q06432 222 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 NFATC2Q13469 925 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 LASP1Q14847 261 aaKnown RBP4.9□□□□□ -1.62
TMEM260-210ENST00000556422 GRIN2CQ14957 1233 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 CHRNA6Q15825 494 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 C18orf21Q32NC0 220 aaPredicted RBP4.9□□□□□ -1.62
TMEM260-210ENST00000556422 IQCCQ4KMZ1 466 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 AGKQ53H12 422 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 SFT2D3Q587I9 215 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 C6orf10Q5SRN2 563 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.9□□□□□ -1.62
TMEM260-210ENST00000556422 ARMC12Q5T9G4 340 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 FBXO42Q6P3S6 717 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 FDX2Q6P4F2 183 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 SPRED2Q7Z698 418 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 SYVN1Q86TM6 617 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 ATCAYQ86WG3 371 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 CMTM8Q8IZV2 173 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 LILRA2Q8N149 483 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 FIBCD1Q8N539 461 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 CLDN19Q8N6F1 224 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 PCDH20Q8N6Y1 951 aaKnown RBP4.9□□□□□ -1.62
TMEM260-210ENST00000556422 DCBLD1Q8N8Z6 715 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 OR5T1Q8NG75 326 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 OR52B6Q8NGF0 335 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 OR2T11Q8NH01 316 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 GATAD2BQ8WXI9 593 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 ECHDC3Q96DC8 303 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 TEX37Q96LM6 180 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 CCNL2Q96S94 520 aaPredicted RBP4.9□□□□□ -1.62
TMEM260-210ENST00000556422 GON7Q9BXV9 100 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 PRMT8Q9NR22 394 aaPredicted RBP4.9□□□□□ -1.62
TMEM260-210ENST00000556422 TDP1Q9NUW8 608 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 CXXC1Q9P0U4 656 aaPredicted RBP4.9□□□□□ -1.62
TMEM260-210ENST00000556422 BTRCQ9Y297 605 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 PRELID3BQ9Y3B1 194 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 AK5Q9Y6K8 562 aa4.9□□□□□ -1.62
TMEM260-210ENST00000556422 GNG14A0A1W2PPG7 69 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PGPEP1LA6NFU8 196 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PRMT5O14744 637 aaPredicted RBP4.9□□□□□ -1.63
TMEM260-210ENST00000556422 TCAPO15273 167 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 ARHGEF9O43307 516 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 VPS26AO75436 327 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 PCDH8O95206 1070 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 CLEC3BP05452 202 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 CYC1P08574 325 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 BPIP17213 487 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 LHCGRP22888 699 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 AKT1P31749 480 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 TALDO1P37837 337 aa4.9□□□□□ -1.63
TMEM260-210ENST00000556422 CSNK1DP48730 415 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms