RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 PRPF18Q99633 342 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 PRRX2Q99811 253 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 LRFN3Q9BTN0 628 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 CADM1Q9BY67 442 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 AICDAQ9GZX7 198 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 KCNH6Q9H252 994 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 LRRN3Q9H3W5 708 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 REEP4Q9H6H4 257 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 IL1RL2Q9HB29 575 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 MYNNQ9NPC7 610 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 LHX9Q9NQ69 397 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 STARD5Q9NSY2 213 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 DNAAF2Q9NVR5 837 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 WDR70Q9NW82 654 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 GID8Q9NWU2 228 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 NDE1Q9NXR1 346 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 TMEM9Q9P0T7 183 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 ADAM29Q9UKF5 820 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 CROTQ9UKG9 612 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 ATXN7L1Q9ULK2 861 aaPredicted RBP9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 PLCL2Q9UPR0 1127 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 PCDHGB2Q9Y5G2 931 aa9.19□□□□□ -0.94
HNRNPC-220ENST00000555585 A0A088AWK7 358 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ASPDHA6ND91 283 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 C4orf51C9J302 202 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 TXNDC9O14530 226 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 SCAMP2O15127 329 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ZSCAN9O15535 394 aaPredicted RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 FLRT2O43155 660 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 KLHL18O94889 574 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 B3GALT4O96024 378 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 C9P02748 559 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 PGRP06401 933 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ZNF806P0C7X5 589 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 CKMT1AP12532 417 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 VCANP13611 3396 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ZNF10P21506 573 aaPredicted RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ATP5A1P25705 553 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 CPOXP36551 454 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 RPL3P39023 403 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ALDH9A1P49189 494 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ARFIP1P53367 373 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 CORO7P57737 925 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 PSME3P61289 254 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 KCNJ2P63252 427 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 PLIN5Q00G26 463 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 MC1RQ01726 317 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 CFHR1Q03591 330 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 SRSF11Q05519 484 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 SPEM2Q0P670 501 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 MN1Q10571 1320 aaPredicted RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 SLAMF1Q13291 335 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 SLC9A5Q14940 896 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 TLR1Q15399 786 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 MAPKAPK3Q16644 382 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 UGT8Q16880 541 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 DPY19L1Q2PZI1 675 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 COQ5Q5HYK3 327 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 PAGE3Q5JUK9 113 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 WASHC2DQ5SRD0 308 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 MANEAQ5SRI9 462 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 TMTC4Q5T4D3 741 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 CPTPQ5TA50 214 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 OR4F3Q6IEY1 312 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 FAM71E1Q6IPT2 247 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ANKRD26P1Q6NSI1 321 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 TMEM71Q6P5X7 295 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 WDR74Q6RFH5 385 aaPredicted RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ZNF793Q6ZN11 406 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 IKBIPQ70UQ0 350 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ABHD13Q7L211 337 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 R3HCC1LQ7Z5L2 792 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 GPR180Q86V85 440 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 RETREG3Q86VR2 466 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 CARFQ8N187 725 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 AMER3Q8N944 861 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ACOT4Q8N9L9 421 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 SUMF1Q8NBK3 374 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ATOH1Q92858 354 aaPredicted RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 TESCQ96BS2 214 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ROPN1LQ96C74 230 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 TM4SF18Q96CE8 201 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 NUDT22Q9BRQ3 303 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 THTPAQ9BU02 230 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ZNF717Q9BY31 904 aaPredicted RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 ROGDIQ9GZN7 287 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 RMND5AQ9H871 391 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 DDX31Q9H8H2 851 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 WDR41Q9HAD4 459 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 SLC52A3Q9NQ40 469 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 MIEF1Q9NQG6 463 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 PRDM7Q9NQW5 492 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 SH3BP4Q9P0V3 963 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 NCDNQ9UBB6 729 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 FBXW2Q9UKT8 454 aa9.18□□□□□ -0.94
HNRNPC-220ENST00000555585 A0A0A6YYD5 115 aa9.17□□□□□ -0.94
HNRNPC-220ENST00000555585 GABRR3A8MPY1 467 aa9.17□□□□□ -0.94
HNRNPC-220ENST00000555585 H0YHG0 523 aa9.17□□□□□ -0.94
HNRNPC-220ENST00000555585 CASC3O15234 703 aaKnown RBP9.17□□□□□ -0.94
HNRNPC-220ENST00000555585 HCRTR1O43613 425 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms