RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 MMEL1Q495T6 779 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 DEFB134Q4QY38 66 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 PAGE2Q7Z2X7 111 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 RETREG3Q86VR2 466 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 NUDT13Q86X67 352 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 NAXDQ8IW45 347 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 RIMKLAQ8IXN7 391 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 ACOT4Q8N9L9 421 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 RBM15BQ8NDT2 890 aaKnown RBP9.7□□□□□ -0.86
SRP54-208ENST00000555557 OR7A2PQ8NGA2 310 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.7□□□□□ -0.862e-7■□□□□ 11.3
SRP54-208ENST00000555557 N4BP2L2Q92802 583 aaPredicted RBP9.7□□□□□ -0.86
SRP54-208ENST00000555557 RNF31Q96EP0 1072 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 SPRTNQ9H040 489 aaPredicted RBP9.7□□□□□ -0.86
SRP54-208ENST00000555557 CLMPQ9H6B4 373 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 DDX31Q9H8H2 851 aaKnown RBP9.7□□□□□ -0.86
SRP54-208ENST00000555557 MRGBPQ9NV56 204 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 IRAK4Q9NWZ3 460 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 TAS2R1Q9NYW7 299 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 PLCL2Q9UPR0 1127 aa9.7□□□□□ -0.86
SRP54-208ENST00000555557 EXO1Q9UQ84 846 aaKnown RBP9.7□□□□□ -0.86
SRP54-208ENST00000555557 SPTBP11277 2137 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 A0A0A6YYD5 115 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 ASPDHA6ND91 283 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 ZNF860A6NHJ4 632 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 CCDC154A6NI56 674 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 WASHC1A8K0Z3 465 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 GABRR3A8MPY1 467 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 TMEM150CB9EJG8 249 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 ZSCAN9O15535 394 aaPredicted RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 MAP3K7O43318 606 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 SRPX2O60687 465 aaPredicted RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 CBFA2T3O75081 653 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 PRKRAO75569 313 aaKnown RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 MED26O95402 600 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 ATXN8OSP0DMR3 200 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 SMIM10L1P0DMW3 83 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 NELFEP18615 380 aaKnown RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 HIST1H1TP22492 207 aaPredicted RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 ACP1P24666 158 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 NUDT2P50583 147 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 PHC1P78364 1004 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 OLR1P78380 273 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 IRX1P78414 480 aaPredicted RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 MXRA7P84157 204 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 C2orf80Q0P641 193 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 SLAMF1Q13291 335 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 MAPRE2Q15555 327 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 UGT8Q16880 541 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 PAGE3Q5JUK9 113 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 PRAMEF17Q5VTA0 474 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 REP15Q6BDI9 236 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 TMEM214Q6NUQ4 689 aaKnown RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 FAM180BQ6P0A1 224 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 PRSS42Q7Z5A4 293 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 TMEM132CQ8N3T6 1108 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 D2HGDHQ8N465 521 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 ZNF655Q8N720 491 aaPredicted RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 SRFBP1Q8NEF9 429 aaKnown RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 OR4D9Q8NGE8 314 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 KLHL6Q8WZ60 621 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 GAL3ST3Q96A11 431 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 TM4SF18Q96CE8 201 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 SMIM10Q96HG1 83 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 SLC41A2Q96JW4 573 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 CCDC74BQ96LY2 380 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 GFM1Q96RP9 751 aaKnown RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 ZBTB18Q99592 522 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 TBCDQ9BTW9 1192 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 SLC25A23Q9BV35 468 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 ZNF768Q9H5H4 540 aaKnown RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 TEX10Q9NXF1 929 aaPredicted RBP9.69□□□□□ -0.86
SRP54-208ENST00000555557 SEMA5BQ9P283 1151 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 FBXW2Q9UKT8 454 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 NDUFAF1Q9Y375 327 aa9.69□□□□□ -0.86
SRP54-208ENST00000555557 A0A1W2PP18 115 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 URADA6NGE7 173 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 NTN3O00634 580 aaPredicted RBP9.68□□□□□ -0.86
SRP54-208ENST00000555557 ATP5HO75947 161 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 PGRP06401 933 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 PIM1P11309 404 aaPredicted RBP9.68□□□□□ -0.86
SRP54-208ENST00000555557 COX7A2P14406 83 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ALOX12P18054 663 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 EFNA1P20827 205 aaPredicted RBP9.68□□□□□ -0.86
SRP54-208ENST00000555557 PRPS1L1P21108 318 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 STX5Q13190 355 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 SLC9A5Q14940 896 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 PRSS53Q2L4Q9 553 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 PRTGQ2VWP7 1150 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 OR4F3Q6IEY1 312 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 FAM71E1Q6IPT2 247 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 SLC2A7Q6PXP3 512 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ARHGAP22Q7Z5H3 698 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 B3GNT8Q7Z7M8 397 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ANKRD46Q86W74 232 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 PDSS2Q86YH6 399 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 WDFY3Q8IZQ1 3526 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 CARFQ8N187 725 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 ARHGEF39Q8N4T4 335 aa9.68□□□□□ -0.86
SRP54-208ENST00000555557 KLHL29Q96CT2 875 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms