RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PCBD2Q9H0N5 130 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 TNFRSF12AQ9NP84 129 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 SPAG4Q9NPE6 437 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 FBXO8Q9NRD0 319 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 SEMA5BQ9P283 1151 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 SERTAD3Q9UJW9 196 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 PTBP2Q9UKA9 531 aaKnown RBP9.41□□□□□ -0.9
PSEN1-213ENST00000555386 SNX7Q9UNH6 387 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 BTRCQ9Y297 605 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 ANGPTL3Q9Y5C1 460 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 PCDHGA7Q9Y5G6 932 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 LOC105369274A0A096LPK9 316 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 LOC102723532A0A0G2JNH3 316 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 DPPA5A6NC42 116 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 E7EQ34 232 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 CFLARO15519 480 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 TLX3O43711 291 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 SCRG1O75711 98 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 OR2B3O76000 313 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 STK17BO94768 372 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 MLYCDO95822 493 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 VARSP26640 1264 aaKnown RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 HSPA13P48723 471 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 ABATP80404 500 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 CLCQ05315 142 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 MED21Q13503 144 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 TRIM25Q14258 630 aaKnown RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 IL11RAQ14626 422 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 RBBP5Q15291 538 aaKnown RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 ZC3H12BQ5HYM0 836 aaKnown RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 SAMD4BQ5PRF9 694 aaKnown RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 C1orf189Q5VU69 101 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 OGFOD2Q6N063 350 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 C8orf82Q6P1X6 216 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 LCTLQ6UWM7 567 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 RPS27LQ71UM5 84 aaKnown RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 SPATA19Q7Z5L4 167 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 PAQR7Q86WK9 346 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 GPR135Q8IZ08 494 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 OR4N4Q8N0Y3 316 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 CARFQ8N187 725 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 TCAIMQ8N3R3 496 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 DNAJC22Q8N4W6 341 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 METTL27Q8N6F8 245 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 GALNT6Q8NCL4 622 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 ICA1LQ8NDH6 482 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 ZNF740Q8NDX6 193 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 TWIST2Q8WVJ9 160 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 CLIP3Q96DZ5 547 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 SPDL1Q96EA4 605 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 LRGUKQ96M69 825 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 ZNF578Q96N58 590 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 NPAS2Q99743 824 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 HOPXQ9BPY8 73 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 DDA1Q9BW61 102 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 ASPSCR1Q9BZE9 553 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 CD244Q9BZW8 370 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 FAM192AQ9GZU8 254 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 Q9H521 79 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 MID1IP1Q9NPA3 183 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 DNAJC11Q9NVH1 559 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 OPTCQ9UBM4 332 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 NDOR1Q9UHB4 597 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 CROTQ9UKG9 612 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 CNOT11Q9UKZ1 510 aaKnown RBP9.4□□□□□ -0.9
PSEN1-213ENST00000555386 PLCL2Q9UPR0 1127 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 RAXQ9Y2V3 346 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 NDUFAF1Q9Y375 327 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 FIS1Q9Y3D6 152 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 DNAJC15Q9Y5T4 150 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 KCNE2Q9Y6J6 123 aa9.4□□□□□ -0.9
PSEN1-213ENST00000555386 PRSS51A0A1B0GVH4 220 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 OR2A25A4D2G3 310 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 CDRT15L2A8MXV6 281 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 H0YGG7 62 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 H0YJX3 145 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 FBP2O00757 339 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 MRASO14807 208 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 ZNF749O43361 778 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 DENRO43583 198 aaKnown RBP9.4□□□□□ -0.91
PSEN1-213ENST00000555386 OR1F1O43749 312 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 C8BP07358 591 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 LYNP07948 512 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 NUDT7P0C024 238 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 LINGO3P0C6S8 592 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 FGF5P12034 268 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 IDO1P14902 403 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 CD1EP15812 388 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 LBPP18428 481 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 TSPAN8P19075 237 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 GPX3P22352 226 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 ALAS2P22557 587 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 PEX2P28328 305 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 EEF1DP29692 281 aaKnown RBP9.4□□□□□ -0.91
PSEN1-213ENST00000555386 GRK3P35626 688 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 SLC6A12P48065 614 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 CCR8P51685 355 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 PKNOX1P55347 436 aa9.4□□□□□ -0.91
PSEN1-213ENST00000555386 ARF3P61204 181 aaPredicted RBP9.4□□□□□ -0.91
PSEN1-213ENST00000555386 CYP4F2P78329 520 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms