RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 SPDYAQ5MJ70 313 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 MANEAQ5SRI9 462 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 CACHD1Q5VU97 1274 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 CES4AQ5XG92 561 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 FRG2Q64ET8 278 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 CLEC6AQ6EIG7 209 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TMIGD1Q6UXZ0 262 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 DBX2Q6ZNG2 339 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 CCDC121Q6ZUS5 278 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 RPS27LQ71UM5 84 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TRPM8Q7Z2W7 1104 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ADCK2Q7Z695 626 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TMPRSS11BQ86T26 416 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 C17orf82Q86X59 251 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PLXDC1Q8IUK5 500 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 LAS2Q8IYD9 372 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ADGRF3Q8IZF5 1079 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 CARFQ8N187 725 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ARHGEF39Q8N4T4 335 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ARL10Q8N8L6 244 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 LMNTD1Q8N9Z9 388 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 BVESQ8NE79 360 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TRPV3Q8NET8 790 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ABHD11Q8NFV4 315 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 OR4K1Q8NGD4 311 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 OR52B6Q8NGF0 335 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 OR2A1Q8NGT9 310 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 OR10G6Q8NH81 332 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 RFWD2Q8NHY2 731 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 AGR3Q8TD06 166 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 SLC37A2Q8TED4 501 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 C10orf82Q8WW14 230 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 NAT6Q93015 286 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 NEIL2Q969S2 332 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TUBGCP3Q96CW5 907 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 MOCOSQ96EN8 888 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 C19orf60Q96EN9 201 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 THOC1Q96FV9 657 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 CMTM7Q96FZ5 175 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 MAELQ96JY0 434 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 QRFPRQ96P65 431 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 IL17FQ96PD4 163 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 FRG2BQ96QU4 278 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 CD180Q99467 661 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 SERPINI1Q99574 410 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 BDH2Q9BUT1 245 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 NLNQ9BYT8 704 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 RAB33BQ9H082 229 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ARRDC1-AS1Q9H2J1 176 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TMEM45AQ9NWC5 275 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 HRASLS2Q9NWW9 162 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ACTR10Q9NZ32 417 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 LRIT1Q9P2V4 623 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 VPS29Q9UBQ0 182 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 EPHA6Q9UF33 1036 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TAC3Q9UHF0 121 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ZFP69BQ9UJL9 534 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PNMA8BQ9ULN7 279 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PADI4Q9UM07 663 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PLAGL1Q9UM63 463 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 ICKQ9UPZ9 632 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 EIF3LQ9Y262 564 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TMED5Q9Y3A6 229 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 RNF11Q9Y3C5 154 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TIMM22Q9Y584 194 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 PCDHGB2Q9Y5G2 931 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 DNAJC15Q9Y5T4 150 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TNRC6BQ9UPQ9 1833 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 TP53BP1Q12888 1972 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 GOLGA4Q13439 2230 aaKnown RBP4.8□□□□□ -1.64
VTI1B-202ENST00000553619 SDK1Q7Z5N4 2213 aa4.8□□□□□ -1.64
VTI1B-202ENST00000553619 HEATR5BQ9P2D3 2071 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ATXN2Q99700 1313 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 A0A0J9YY10 115 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 A0A1W2PPV9 198 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 TRBC2A0A5B9 178 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 DYTNA2CJ06 578 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 GSAPA4D1B5 854 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 OR5K3A6NET4 321 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 CCT8L1PA6NM43 557 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 E7EQ34 232 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 NPIPB8E9PQR5 432 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 H7BY64 318 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 BTN3A3O00478 584 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 PPP6CO00743 305 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF195O14628 629 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 PIP5K1BO14986 540 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 PPM1DO15297 605 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 OR1F1O43749 312 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 DUX1O43812 170 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SRPX2O60687 465 aaPredicted RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SDC3O75056 442 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 LRP3O75074 770 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 GUCY1B2O75343 617 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SEC22BO75396 215 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 SKAP2O75563 359 aaPredicted RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 RSL1D1O76021 490 aaKnown RBP4.79□□□□□ -1.64
VTI1B-202ENST00000553619 EML2O95834 649 aa4.79□□□□□ -1.64
VTI1B-202ENST00000553619 PDYNP01213 254 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms