RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	ENTPD4	Q9Y227	616 aa		10.76	□□□□□ -0.69
TUBA1B-208	ENST00000552984	MTO1	Q9Y2Z2	717 aa	Known RBP	10.76	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SAR1B	Q9Y6B6	198 aa		10.76	□□□□□ -0.69
TUBA1B-208	ENST00000552984	PDZD2	O15018	2839 aa		10.76	□□□□□ -0.69
TUBA1B-208	ENST00000552984	TRBV11-1	A0A0K0K1C0	115 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	MYOCOS	A0A1B0GUC4	107 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	ASPDH	A6ND91	283 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	TAPBP	O15533	448 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	HNRNPR	O43390	633 aa	Known RBP	10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SLC25A12	O75746	678 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SP1	P08047	785 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SERPINA6	P08185	405 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	RNH1	P13489	461 aa	Known RBP	10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CD46	P15529	392 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	TNFRSF8	P28908	595 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	BTN3A2	P78410	334 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CDKL1	Q00532	357 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	OR4D1	Q15615	310 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	MAPKAPK3	Q16644	382 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	C3P1	Q6ZMU1	363 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	C16orf47	Q6ZP98	133 aa	Predicted RBP	10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	VN1R5	Q7Z5H4	357 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CLNK	Q7Z7G1	428 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	ADAMTSL2	Q86TH1	951 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SIAH3	Q8IW03	269 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	NKAP	Q8N5F7	415 aa	Known RBP	10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	FAM47B	Q8NA70	645 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	EXT2	Q93063	718 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	MAGED4	Q96JG8	741 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CSF3R	Q99062	836 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	PRDM9	Q9NQV7	894 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SUCO	Q9UBS9	1254 aa	Known RBP	10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	ASB1	Q9Y576	335 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CLDN16	Q9Y5I7	305 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	KCNE2	Q9Y6J6	123 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	POLQ	O75417	2590 aa		10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	INTS1	Q8N201	2190 aa	Known RBP	10.75	□□□□□ -0.69
TUBA1B-208	ENST00000552984	EXPH5	Q8NEV8	1989 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CCDC188	H7C350	402 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	C19orf84	I3L1E1	186 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	PSMD12	O00232	456 aa	Predicted RBP	10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	ERI3	O43414	337 aa	Known RBP	10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	PRKN	O60260	465 aa	Predicted RBP	10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	NME2P1	O60361	137 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	MYO1D	O94832	1006 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	C1GALT1C1L	P0DN25	315 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	MYBL2	P10244	700 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CD22	P20273	847 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	NME2	P22392	152 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CERS1	P27544	350 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	HSPA7	P48741	367 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	NR0B1	P51843	470 aa	Known RBP	10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	MLF1	P58340	268 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SKP1	P63208	163 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	RBPJ	Q06330	500 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	C2orf54	Q08AI8	447 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	TGFBI	Q15582	683 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SLC25A25	Q6KCM7	469 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	TMIGD1	Q6UXZ0	262 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	FGD2	Q7Z6J4	655 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CHERP	Q8IWX8	916 aa	Known RBP	10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SCUBE1	Q8IWY4	988 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	MCEMP1	Q8IX19	187 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	LGI4	Q8N135	537 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	TMEM178A	Q8NBL3	297 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	APCDD1L	Q8NCL9	501 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	TRPV3	Q8NET8	790 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	GAL3ST3	Q96A11	431 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	MS4A6E	Q96DS6	147 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	RUNDC3B	Q96NL0	473 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	LIN28A	Q9H9Z2	209 aa	Known RBP	10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SAYSD1	Q9NPB0	183 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	PNO1	Q9NRX1	252 aa	Known RBP	10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	WWOX	Q9NZC7	414 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	PCDHGB6	Q9Y5F9	930 aa		10.74	□□□□□ -0.69
TUBA1B-208	ENST00000552984	NIN	Q8N4C6	2090 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	ADGRG4	Q8IZF6	3080 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	TCRBV9S1A1T	A0A576	114 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	LRIT2	A6NDA9	550 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	URAD	A6NGE7	173 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	RAD51C	O43502	376 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	FAM155B	O75949	473 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	C1QA	P02745	245 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CCDC166	P0CW27	439 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CD1D	P15813	335 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	ZNF24	P17028	368 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	GNAZ	P19086	355 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	EPOR	P19235	508 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	HTR1E	P28566	365 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	PTGER1	P34995	402 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	CYB561	P49447	251 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	MEOX1	P50221	254 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	PLA2G16	P53816	162 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	GPR85	P60893	370 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	ART3	Q13508	389 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	EFTUD2	Q15029	972 aa	Known RBP eCLIP	10.73	□□□□□ -0.69	6e-7	■■■□□ 19.1
TUBA1B-208	ENST00000552984	NIPAL1	Q6NVV3	410 aa		10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.73	□□□□□ -0.69
TUBA1B-208	ENST00000552984	SPPL2C	Q8IUH8	684 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms