RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 PHF13Q86YI8 300 aaPredicted RBP7.58□□□□□ -1.2
PRIM1-208ENST00000552590 C9orf106Q8NAJ2 232 aa7.58□□□□□ -1.2
PRIM1-208ENST00000552590 NELFBQ8WX92 580 aa7.58□□□□□ -1.2
PRIM1-208ENST00000552590 HSPH1Q92598 858 aa7.58□□□□□ -1.2
PRIM1-208ENST00000552590 ANKRD9Q96BM1 317 aaPredicted RBP7.58□□□□□ -1.2
PRIM1-208ENST00000552590 NTNG2Q96CW9 530 aa7.58□□□□□ -1.2
PRIM1-208ENST00000552590 SRPK1Q96SB4 655 aaKnown RBP7.58□□□□□ -1.2
PRIM1-208ENST00000552590 FAM173AQ9BQD7 235 aa7.58□□□□□ -1.2
PRIM1-208ENST00000552590 RBCK1Q9BYM8 510 aa7.58□□□□□ -1.2
PRIM1-208ENST00000552590 FAM96AQ9H5X1 160 aa7.58□□□□□ -1.2
PRIM1-208ENST00000552590 TUBA8Q9NY65 449 aaPredicted RBP7.58□□□□□ -1.2
PRIM1-208ENST00000552590 LIPT1Q9Y234 373 aa7.58□□□□□ -1.2
PRIM1-208ENST00000552590 PCLOQ9Y6V0 5065 aa7.58□□□□□ -1.2
PRIM1-208ENST00000552590 LOC100289279A0A1B0GTE1 492 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.57□□□□□ -1.2
PRIM1-208ENST00000552590 MBD3L3A6NE82 208 aaPredicted RBP7.57□□□□□ -1.2
PRIM1-208ENST00000552590 A8MVJ9 347 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 A8MXE2 369 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 KDM1AO60341 852 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 OR10H2O60403 315 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 OR6B1O95007 311 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 F13A1P00488 732 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 SOD3P08294 240 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 CNR1P21554 472 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 IL1R2P27930 398 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 AVPR1BP47901 424 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 SSR4P51571 173 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 GSTM4Q03013 218 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 ZBTB17Q13105 803 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 ZNF750Q32MQ0 723 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 SH2D5Q6ZV89 423 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 SPATA22Q8NHS9 363 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 MBD3L2Q8NHZ7 208 aaPredicted RBP7.57□□□□□ -1.2
PRIM1-208ENST00000552590 NEIL3Q8TAT5 605 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 BLOC1S5Q8TDH9 187 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 FATE1Q969F0 183 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 IMP4Q96G21 291 aaKnown RBP7.57□□□□□ -1.2
PRIM1-208ENST00000552590 HS6ST2Q96MM7 605 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 TSGA13Q96PP4 275 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 GSDMAQ96QA5 445 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 ZNF747Q9BV97 191 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 TRABDQ9H4I3 376 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 HPF1Q9NWY4 346 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 FBXW2Q9UKT8 454 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 CTNND2Q9UQB3 1225 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 PKP3Q9Y446 797 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 SACSQ9NZJ4 4579 aa7.57□□□□□ -1.2
PRIM1-208ENST00000552590 C15orf38-AP3S2A0A0A6YYH1 394 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 TRBV11-1A0A0K0K1C0 115 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 FAM237AA0A1B0GTK4 181 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 FAM95CA0A1B0GW59 222 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 OR2A25A4D2G3 310 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 CD8B2A6NJW9 211 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 F8VZ95 297 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 P2RX6O15547 441 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 RNF8O76064 485 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 SRP72O76094 671 aaKnown RBP7.56□□□□□ -1.2
PRIM1-208ENST00000552590 GFPT2O94808 682 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 RFPL3SP0C7P2 107 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 TCF4P15884 667 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 MPP1Q00013 466 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 GRB7Q14451 532 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 NFKBIBQ15653 356 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 CLEC16AQ2KHT3 1053 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 CR1LQ2VPA4 569 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 CCDC122Q5T0U0 273 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 RNF187Q5TA31 235 aaPredicted RBP7.56□□□□□ -1.2
PRIM1-208ENST00000552590 FAM47EQ6ZV65 393 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 GLT6D1Q7Z4J2 308 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 CLDN19Q8N6F1 224 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 BANPQ8N9N5 519 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 PLPP5Q8NEB5 264 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 OR2L3Q8NG85 312 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 OR10H5Q8NGA6 315 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 OR2L8Q8NGY9 312 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 AKAP1Q92667 903 aaKnown RBP eCLIP7.56□□□□□ -1.2
PRIM1-208ENST00000552590 COPS8Q99627 209 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 TIMP4Q99727 224 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 GOLPH3LQ9H4A5 285 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 MANSC1Q9H8J5 431 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 VPS37BQ9H9H4 285 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 LIN28AQ9H9Z2 209 aaKnown RBP7.56□□□□□ -1.2
PRIM1-208ENST00000552590 UBP1Q9NZI7 540 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 CRLS1Q9UJA2 301 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 CAMK2AQ9UQM7 478 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 KLK4Q9Y5K2 254 aa7.56□□□□□ -1.2
PRIM1-208ENST00000552590 MAGED1Q9Y5V3 778 aaPredicted RBP7.56□□□□□ -1.2
PRIM1-208ENST00000552590 LOC100653049A0A140TA62 436 aa7.55□□□□□ -1.2
PRIM1-208ENST00000552590 MAGEB17A8MXT2 336 aa7.55□□□□□ -1.2
PRIM1-208ENST00000552590 H0YIG0 161 aa7.55□□□□□ -1.2
PRIM1-208ENST00000552590 SGK494L7N484 410 aa7.55□□□□□ -1.2
PRIM1-208ENST00000552590 KPNA5O15131 536 aa7.55□□□□□ -1.2
PRIM1-208ENST00000552590 STX7O15400 261 aaKnown RBP7.55□□□□□ -1.2
PRIM1-208ENST00000552590 KRT34O76011 436 aa7.55□□□□□ -1.2
PRIM1-208ENST00000552590 SERPINC1P01008 464 aa7.55□□□□□ -1.2
PRIM1-208ENST00000552590 CCKARP32238 428 aa7.55□□□□□ -1.2
PRIM1-208ENST00000552590 SRP14P37108 136 aaKnown RBP7.55□□□□□ -1.2
PRIM1-208ENST00000552590 FAPQ12884 760 aa7.55□□□□□ -1.2
PRIM1-208ENST00000552590 FAM53BQ14153 422 aa7.55□□□□□ -1.2
PRIM1-208ENST00000552590 P3H1Q32P28 736 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms