RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 ATMQ13315 3056 aa12.98□□□□□ -0.33
TROAP-213ENST00000550709 CCDC151A5D8V7 595 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 EIF4E1BA6NMX2 242 aaKnown RBP12.97□□□□□ -0.33
TROAP-213ENST00000550709 MAGEB17A8MXT2 336 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 PSMD12O00232 456 aaPredicted RBP12.97□□□□□ -0.33
TROAP-213ENST00000550709 B3GALT2O43825 422 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 PRB1P04280 392 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 FHP07954 510 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 RNH1P13489 461 aaKnown RBP12.97□□□□□ -0.33
TROAP-213ENST00000550709 ACPPP15309 386 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 CERS1P27544 350 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 SERPINB1P30740 379 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 HPDP32754 393 aaPredicted RBP12.97□□□□□ -0.33
TROAP-213ENST00000550709 PIK3CBP42338 1070 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 RAP1GDS1P52306 607 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 EFNA3P52797 238 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 NAGLUP54802 743 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 RRADP55042 308 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 PHEXP78562 749 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 EEF1A2Q05639 463 aaKnown RBP12.97□□□□□ -0.33
TROAP-213ENST00000550709 RUNX2Q13950 521 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 ADPRMQ3LIE5 342 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 NIPAL1Q6NVV3 410 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 MED25Q71SY5 747 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 UBE3DQ7Z6J8 389 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 METTL21AQ8WXB1 218 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 REPS1Q96D71 796 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 WBP1Q96G27 269 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 FER1L6-AS2Q96M78 137 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 QRFPRQ96P65 431 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 FAM111AQ96PZ2 611 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 SORBS1Q9BX66 1292 aaKnown RBP12.97□□□□□ -0.33
TROAP-213ENST00000550709 C1QTNF3Q9BXJ4 246 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 ZNF71Q9NQZ8 489 aaPredicted RBP12.97□□□□□ -0.33
TROAP-213ENST00000550709 SLC17A7Q9P2U7 560 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 ADGRE2Q9UHX3 823 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 PLLPQ9Y342 182 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 FER1L5A0AVI2 2057 aa12.97□□□□□ -0.33
TROAP-213ENST00000550709 ATRXP46100 2492 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 A0A088AWK7 358 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 MKRN2OSH3BPM6 223 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 AGPSO00116 658 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 OR4F21O95013 312 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 ZNF10P21506 573 aaPredicted RBP12.96□□□□□ -0.33
TROAP-213ENST00000550709 SSR2P43308 183 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 MTTPP55157 894 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 IFT88Q13099 833 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 AP5B1Q2VPB7 878 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 TMEM35AQ53FP2 167 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 CFAP157Q5JU67 520 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 DCAF10Q5QP82 559 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 BEND6Q5SZJ8 279 aaPredicted RBP12.96□□□□□ -0.33
TROAP-213ENST00000550709 DEPDC1Q5TB30 811 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 KHDRBS2Q5VWX1 349 aaKnown RBP12.96□□□□□ -0.33
TROAP-213ENST00000550709 FRG2Q64ET8 278 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 LANCL3Q6ZV70 420 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 GPRIN3Q6ZVF9 776 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 C10orf107Q8IVU9 208 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 APLFQ8IW19 511 aaPredicted RBP12.96□□□□□ -0.33
TROAP-213ENST00000550709 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 CA13Q8N1Q1 262 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 CDYL2Q8N8U2 506 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 TMEM102Q8N9M5 508 aaPredicted RBP12.96□□□□□ -0.33
TROAP-213ENST00000550709 CLEC1AQ8NC01 280 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 SRFBP1Q8NEF9 429 aaKnown RBP12.96□□□□□ -0.33
TROAP-213ENST00000550709 OR11G2Q8NGC1 345 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 RDH11Q8TC12 318 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 TCP10LQ8TDR4 215 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 CCDC126Q96EE4 140 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 L3HYPDHQ96EM0 354 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 ABHD17AQ96GS6 310 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 KCNC2Q96PR1 638 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 FRG2BQ96QU4 278 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 CENPKQ9BS16 269 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 ELOVL6Q9H5J4 265 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 LANCL2Q9NS86 450 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 FARSBQ9NSD9 589 aaKnown RBP12.96□□□□□ -0.33
TROAP-213ENST00000550709 ZNF225Q9UK10 706 aa12.96□□□□□ -0.33
TROAP-213ENST00000550709 MDC1Q14676 2089 aaKnown RBP12.96□□□□□ -0.33
TROAP-213ENST00000550709 PIEZO2Q9H5I5 2752 aa12.96□□□□□ -0.34
TROAP-213ENST00000550709 IGHV3-20A0A0C4DH32 117 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 ETHE1O95571 254 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 MLYCDO95822 493 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 C8orf89P0DMQ9 161 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 NR1D1P20393 614 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 ATP5A1P25705 553 aaKnown RBP12.95□□□□□ -0.34
TROAP-213ENST00000550709 PTX3P26022 381 aaPredicted RBP12.95□□□□□ -0.34
TROAP-213ENST00000550709 BTG2P78543 158 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 LCP2Q13094 533 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 ABRAXAS2Q15018 415 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 NSDHLQ15738 373 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 TUBB8Q3ZCM7 444 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 TCHHL1Q5QJ38 904 aaPredicted RBP12.95□□□□□ -0.34
TROAP-213ENST00000550709 ZNF793Q6ZN11 406 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 AMER2Q8N7J2 671 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 ACOT4Q8N9L9 421 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 FAM47BQ8NA70 645 aa12.95□□□□□ -0.34
TROAP-213ENST00000550709 C9orf43Q8TAL5 461 aaPredicted RBP12.95□□□□□ -0.34
TROAP-213ENST00000550709 WDR20Q8TBZ3 569 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms