RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ITPR3Q14573 2671 aa14.38□□□□□ -0.11
RAB5C-205ENST00000550013 MAP1AP78559 2803 aaPredicted RBP14.37□□□□□ -0.11
RAB5C-205ENST00000550013 NKX2-6A6NCS4 301 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 FAM90A27PA6NNH2 459 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 KLRC4-KLRK1H3BQV0 150 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 FANCGO15287 622 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 PDE9AO76083 593 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 IGFBP2P18065 325 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 PPP2R1BP30154 601 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 RBBP5Q15291 538 aaKnown RBP14.37□□□□□ -0.11
RAB5C-205ENST00000550013 MSS51Q4VC12 460 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 HECTD2Q5U5R9 776 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 SBSNQ6UWP8 590 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 TMPRSS11BQ86T26 416 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 IGDCC3Q8IVU1 814 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 CNTN4Q8IWV2 1026 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 TMEM156Q8N614 296 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 GPATCH11Q8N954 259 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 ZFP62Q8NB50 900 aaPredicted RBP14.37□□□□□ -0.11
RAB5C-205ENST00000550013 ARMC2Q8NEN0 867 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 B3GNT7Q8NFL0 401 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 OR52N2Q8NGI0 321 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 CREB3L4Q8TEY5 395 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 ATL1Q8WXF7 558 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 PDLIM2Q96JY6 352 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 TRIM54Q9BYV2 358 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 UCK2Q9BZX2 261 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 PELI2Q9HAT8 420 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 CLK4Q9HAZ1 481 aaKnown RBP14.37□□□□□ -0.11
RAB5C-205ENST00000550013 FBXW2Q9UKT8 454 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 RNF6Q9Y252 685 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 DYRK1BQ9Y463 629 aa14.37□□□□□ -0.11
RAB5C-205ENST00000550013 A0A0G2JN53 185 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 URADA6NGE7 173 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 TGFBR3LH3BV60 316 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 NRDCO43847 1150 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 ITGA10O75578 1167 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 CLCN2P51788 898 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 SPANXN3Q5MJ09 141 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 NXPE4Q6UWF7 544 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 C16orf47Q6ZP98 133 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-205ENST00000550013 KIAA0408Q6ZU52 694 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 THOC6Q86W42 341 aaKnown RBP14.36□□□□□ -0.11
RAB5C-205ENST00000550013 CCDC71Q8IV32 467 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-205ENST00000550013 TRPV3Q8NET8 790 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 C16orf52Q8NHV5 167 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 NCLNQ969V3 563 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 CERS2Q96G23 380 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 AIF1LQ9BQI0 150 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 LIN28AQ9H9Z2 209 aaKnown RBP14.36□□□□□ -0.11
RAB5C-205ENST00000550013 PLAC1Q9HBJ0 212 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 PNO1Q9NRX1 252 aaKnown RBP14.36□□□□□ -0.11
RAB5C-205ENST00000550013 PLSCR2Q9NRY7 297 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 DEPPQ9NTK1 212 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 KCMF1Q9P0J7 381 aa14.36□□□□□ -0.11
RAB5C-205ENST00000550013 PINLYPA6NC86 204 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 PRKNO60260 465 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-205ENST00000550013 TTC4O95801 387 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 SERPINA6P08185 405 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 ENO2P09104 434 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-205ENST00000550013 HNRNPFP52597 415 aaKnown RBP14.35□□□□□ -0.11
RAB5C-205ENST00000550013 BTN3A2P78410 334 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 TFF3Q07654 80 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 RUNX2Q13950 521 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 PPP1R3AQ16821 1122 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 EMC4Q5J8M3 183 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 TEDDM1Q5T9Z0 273 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 TMEM211Q6ICI0 200 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 GALNT7Q86SF2 657 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 SCUBE1Q8IWY4 988 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 TMEM52Q8NDY8 209 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 LILRB4Q8NHJ6 448 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 GABPB2Q8TAK5 448 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-205ENST00000550013 ASB5Q8WWX0 329 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 SREK1Q8WXA9 508 aaKnown RBP14.35□□□□□ -0.11
RAB5C-205ENST00000550013 PBKQ96KB5 322 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 DEFB127Q9H1M4 99 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 TP63Q9H3D4 680 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-205ENST00000550013 SLC22A14Q9Y267 594 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 VWA7Q9Y334 891 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 MMACHCQ9Y4U1 282 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 CLDN16Q9Y5I7 305 aa14.35□□□□□ -0.11
RAB5C-205ENST00000550013 AKAP6Q13023 2319 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 A0A0G2JMM0 328 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 A0A1W2PPB8 328 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 A0A1W2PRS3 328 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 USP27XA6NNY8 438 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 KIR3DP1A8MWS1 328 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 PGRMC1O00264 195 aaKnown RBP14.34□□□□□ -0.11
RAB5C-205ENST00000550013 CDC7O00311 574 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 TOXO94900 526 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 CHRNB4P30926 498 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 SSR4P51571 173 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 GPR143P51810 404 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 NUP107P57740 925 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 BBS9Q3SYG4 887 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 HP1BP3Q5SSJ5 553 aaPredicted RBP14.34□□□□□ -0.11
RAB5C-205ENST00000550013 FAM45BPQ6NSW5 357 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 ARHGAP11AQ6P4F7 1023 aa14.34□□□□□ -0.11
RAB5C-205ENST00000550013 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms