RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 TFEBP19484 476 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 HNF4AP41235 474 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 SSR4P51571 173 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 RAB8AP61006 207 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 STXBP1P61764 594 aaKnown RBP12.67□□□□□ -0.38
TROAP-211ENST00000549891 REEP5Q00765 189 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 RBBP5Q15291 538 aaKnown RBP12.67□□□□□ -0.38
TROAP-211ENST00000549891 CYP1B1Q16678 543 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 BBS9Q3SYG4 887 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 CEP128Q6ZU80 1094 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 GAS2L3Q86XJ1 694 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 GPALPP1Q8IXQ4 340 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 ZFP62Q8NB50 900 aaPredicted RBP12.67□□□□□ -0.38
TROAP-211ENST00000549891 APCDD1LQ8NCL9 501 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 LILRB4Q8NHJ6 448 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 VMP1Q96GC9 406 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 FAR2Q96K12 515 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 TSNARE1Q96NA8 513 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 RHBGQ9H310 441 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 KCNJ16Q9NPI9 418 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 PPANQ9NQ55 473 aaKnown RBP12.67□□□□□ -0.38
TROAP-211ENST00000549891 NECTIN3Q9NQS3 549 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 ZFATQ9P243 1243 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 FBXW2Q9UKT8 454 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 YARS2Q9Y2Z4 477 aaKnown RBP12.67□□□□□ -0.38
TROAP-211ENST00000549891 NEU2Q9Y3R4 380 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 KCNE2Q9Y6J6 123 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 ZFHX3Q15911 3703 aa12.67□□□□□ -0.38
TROAP-211ENST00000549891 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
TROAP-211ENST00000549891 A0A088AWK7 358 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 GOLGA6L10A0A0M3HER8 536 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 ACOT7O00154 380 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 CLDN4O14493 209 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 SMIM10L1P0DMW3 83 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 IGFBP2P18065 325 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 ZNF10P21506 573 aaPredicted RBP12.66□□□□□ -0.38
TROAP-211ENST00000549891 GABRB3P28472 473 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 HPDP32754 393 aaPredicted RBP12.66□□□□□ -0.38
TROAP-211ENST00000549891 RFC3P40938 356 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 CMPK2Q5EBM0 449 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 TOR1AIP1Q5JTV8 583 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 HECTD2Q5U5R9 776 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 FAM45BPQ6NSW5 357 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 ACAD11Q709F0 780 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 TMPRSS11BQ86T26 416 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 THOC6Q86W42 341 aaKnown RBP12.66□□□□□ -0.38
TROAP-211ENST00000549891 CA13Q8N1Q1 262 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 ANKRD53Q8N9V6 530 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 TTLQ8NG68 377 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 FAM45AQ8TCE6 357 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 CERS2Q96G23 380 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 PDLIM5Q96HC4 596 aaKnown RBP12.66□□□□□ -0.38
TROAP-211ENST00000549891 SMIM10Q96HG1 83 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 PDLIM2Q96JY6 352 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 NPLQ9BXD5 320 aaPredicted RBP12.66□□□□□ -0.38
TROAP-211ENST00000549891 SPNS1Q9H2V7 528 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 PNO1Q9NRX1 252 aaKnown RBP12.66□□□□□ -0.38
TROAP-211ENST00000549891 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 PPIEQ9UNP9 301 aaKnown RBP12.66□□□□□ -0.38
TROAP-211ENST00000549891 ERVK-11Q9UQG0 969 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 MRPS33Q9Y291 106 aaKnown RBP12.66□□□□□ -0.38
TROAP-211ENST00000549891 VWA7Q9Y334 891 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 JRKLQ9Y4A0 524 aa12.66□□□□□ -0.38
TROAP-211ENST00000549891 EML6Q6ZMW3 1958 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 A8MVJ9 347 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 PGRMC1O00264 195 aaKnown RBP12.65□□□□□ -0.38
TROAP-211ENST00000549891 ZFAND5O76080 213 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 GSTM2P28161 218 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 FNTAP49354 379 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 HSD17B7P56937 341 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 GPR85P60893 370 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 BTN3A2P78410 334 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 HYAL2Q12891 473 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 PPP1R7Q15435 360 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 RNASEH2BQ5TBB1 312 aaKnown RBP12.65□□□□□ -0.38
TROAP-211ENST00000549891 NXPE4Q6UWF7 544 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 RGS9BPQ6ZS82 235 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 MDGA2Q7Z553 956 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 MARVELD2Q8N4S9 558 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 GAL3ST3Q96A11 431 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 MS4A14Q96JA4 679 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 PRTFDC1Q9NRG1 225 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 HPF1Q9NWY4 346 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 RNF6Q9Y252 685 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 SLC22A14Q9Y267 594 aa12.65□□□□□ -0.38
TROAP-211ENST00000549891 FAM90A27PA6NNH2 459 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 NRDCO43847 1150 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 H2AFYO75367 372 aaKnown RBP12.64□□□□□ -0.39
TROAP-211ENST00000549891 PDE9AO76083 593 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 GNAZP19086 355 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 SAT1P21673 171 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 MSX1P28360 303 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 HNMTP50135 292 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 PLGLB1Q02325 96 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 SLC13A2Q13183 592 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 TEDDM1Q5T9Z0 273 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 CES4AQ5XG92 561 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 SBSNQ6UWP8 590 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 SCUBE1Q8IWY4 988 aa12.64□□□□□ -0.39
TROAP-211ENST00000549891 DMRTC2Q8IXT2 367 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms