RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 GFAPP14136 432 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 PIK3CGP48736 1102 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 MFAP5Q13361 173 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 MRPL49Q13405 166 aaKnown RBP9.19□□□□□ -0.94
HDAC7-229ENST00000549883 E2F2Q14209 437 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 SLC29A2Q14542 456 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 NAA30Q147X3 362 aaPredicted RBP9.19□□□□□ -0.94
HDAC7-229ENST00000549883 TBCCQ15814 346 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 BTBD16Q32M84 506 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 ADPRMQ3LIE5 342 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 TEX35Q5T0J7 233 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 ABHD17CQ6PCB6 329 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 PAPD4Q6PIY7 484 aaKnown RBP9.19□□□□□ -0.94
HDAC7-229ENST00000549883 CEP128Q6ZU80 1094 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 GOLGA7Q7Z5G4 137 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 CYP4X1Q8N118 509 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 KRT78Q8N1N4 520 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 KIF2BQ8N4N8 673 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 ZADH2Q8N4Q0 377 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 PTGR2Q8N8N7 351 aaPredicted RBP9.19□□□□□ -0.94
HDAC7-229ENST00000549883 OR7G3Q8NG95 312 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 DNAJB14Q8TBM8 379 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 ZNF473Q8WTR7 871 aaKnown RBP9.19□□□□□ -0.94
HDAC7-229ENST00000549883 GAL3ST3Q96A11 431 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 PTCHD1Q96NR3 888 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 CDK15Q96Q40 435 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 OR1F2PQ96R84 312 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 CSF3RQ99062 836 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 EFCAB11Q9BUY7 163 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 CAPS2Q9BXY5 557 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 MS4A8Q9BY19 250 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 L2HGDHQ9H9P8 463 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 PRDM7Q9NQW5 492 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 MAP10Q9P2G4 905 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 XPR1Q9UBH6 696 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 RNF11Q9Y3C5 154 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 PCDHGA10Q9Y5H3 936 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 EML6Q6ZMW3 1958 aa9.19□□□□□ -0.94
HDAC7-229ENST00000549883 IGKV3D-11A0A0A0MRZ8 115 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 A8MUI8 341 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 TCP11X1B4DZS4 312 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 E2F3O00716 465 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 PPP6CO00743 305 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 OR7A17O14581 309 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 PRMT3O60678 531 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 ETHE1O95571 254 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 WDPCPO95876 746 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 SHBGP04278 402 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 ABHD2P08910 425 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 RNH1P13489 461 aaKnown RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 EPB42P16452 691 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 EEF1DP29692 281 aaKnown RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 CASP2P42575 452 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 SERPINB9P50453 376 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 NEK2P51955 445 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 ALDH18A1P54886 795 aaKnown RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 OR4D2P58180 307 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 STXBP1P61764 594 aaKnown RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 DDX39BQ13838 428 aaKnown RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 PCBP2Q15366 365 aaKnown RBP eCLIP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 IRAK1BP1Q5VVH5 260 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 PLAG1Q6DJT9 500 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 MED27Q6P2C8 311 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 TRMT10CQ7L0Y3 403 aaKnown RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 CLNKQ7Z7G1 428 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 MYLK4Q86YV6 388 aaPredicted RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 HPS6Q86YV9 775 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 LAS2Q8IYD9 372 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 FAM47BQ8NA70 645 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 OR2L5Q8NG80 312 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 OR52B6Q8NGF0 335 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 HUS1BQ8NHY5 278 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 SREK1Q8WXA9 508 aaKnown RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 PHF21BQ96EK2 531 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 SCYL1Q96KG9 808 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 LMF1Q96S06 567 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 MAPKAP1Q9BPZ7 522 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 TUBB6Q9BUF5 446 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 REXO4Q9GZR2 422 aaKnown RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 ILKAPQ9H0C8 392 aaPredicted RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 TSPYL1Q9H0U9 437 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 OR51B5Q9H339 312 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 ZBTB26Q9HCK0 441 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 KCMF1Q9P0J7 381 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 ZNF180Q9UJW8 692 aa9.18□□□□□ -0.94
HDAC7-229ENST00000549883 UBR5O95071 2799 aaPredicted RBP9.18□□□□□ -0.94
HDAC7-229ENST00000549883 CLEC18AA5D8T8 446 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 URADA6NGE7 173 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 WASHC1A8K0Z3 465 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 CYSRT1A8MQ03 144 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 SYCE1LA8MT33 242 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 GOLGA8RI6L899 631 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 CYR61O00622 381 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 KRT38O76015 456 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 WISP2O76076 250 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 RNF224P0DH78 156 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 TSPAN8P19075 237 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 ATP5A1P25705 553 aaKnown RBP9.17□□□□□ -0.94
HDAC7-229ENST00000549883 LIM2P55344 173 aa9.17□□□□□ -0.94
HDAC7-229ENST00000549883 SLC26A5P58743 744 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms