RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CYP1B1Q16678 543 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 TOR1AIP1Q5JTV8 583 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 ARMC3Q5W041 872 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 DUPD1Q68J44 220 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 ZNF585AQ6P3V2 769 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 IL20RBQ6UXL0 311 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 QSOX2Q6ZRP7 698 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 ABHD13Q7L211 337 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 CA13Q8N1Q1 262 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 SLC35F6Q8N357 371 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 TBC1D19Q8N5T2 526 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 ARMC2Q8NEN0 867 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 ABHD11Q8NFV4 315 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 OR4K1Q8NGD4 311 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 OR5M3Q8NGP4 307 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 LILRB4Q8NHJ6 448 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 ASB5Q8WWX0 329 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 SLC5A11Q8WWX8 675 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 NEIL2Q969S2 332 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 PDLIM2Q96JY6 352 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 SIGLEC10Q96LC7 697 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 TRIM54Q9BYV2 358 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 FAM129AQ9BZQ8 928 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 TRIM45Q9H8W5 580 aaPredicted RBP11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 PRDM9Q9NQV7 894 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 TNFRSF10DQ9UBN6 386 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 ZFP69BQ9UJL9 534 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 ZFHX3Q15911 3703 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 TCRBV16S1A1N1A0A5B0 115 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 C4orf51C9J302 202 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 EIF3FO00303 357 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 AHSGP02765 367 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 CD1EP15812 388 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 GABRB3P28472 473 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 CHRNB4P30926 498 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 TRHRP34981 398 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 SCTRP47872 440 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 SKP1P63208 163 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 PDAP1Q13442 181 aaKnown RBP11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 ZNF750Q32MQ0 723 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 GXYLT1Q4G148 440 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 EMC4Q5J8M3 183 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 HP1BP3Q5SSJ5 553 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 HECTD2Q5U5R9 776 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 CES4AQ5XG92 561 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 LRRC8EQ6NSJ5 796 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 TMPRSS11BQ86T26 416 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 GPATCH11Q8N954 259 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 ANKRD53Q8N9V6 530 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 POGLUT1Q8NBL1 392 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 ACBD4Q8NC06 268 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 B3GNT7Q8NFL0 401 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 OR56A3Q8NH54 315 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 C16orf52Q8NHV5 167 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 NT5CQ8TCD5 201 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 CCT6BQ92526 530 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 NCLNQ969V3 563 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 SEC16BQ96JE7 1060 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 OSBPL9Q96SU4 736 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 FAM167BQ9BTA0 163 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 TP63Q9H3D4 680 aaPredicted RBP11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 PNPLA3Q9NST1 481 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 DEPPQ9NTK1 212 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 ALKBH4Q9NXW9 302 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 DYRK1BQ9Y463 629 aa11.14□□□□□ -0.63
TRAFD1-205ENST00000548277 NAV3Q8IVL0 2385 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 URADA6NGE7 173 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 FOXO6A8MYZ6 492 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 WWP2O00308 870 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 ZWINTO95229 277 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 CD99P14209 185 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 DNAJA1P31689 397 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 MAGEA3P43357 314 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 SSR4P51571 173 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 IST1P53990 364 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 IL2P60568 153 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 PPIAP62937 165 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 TFF3Q07654 80 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 SP140Q13342 867 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 RUNX2Q13950 521 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 XKR6Q5GH73 641 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 ARHGAP11AQ6P4F7 1023 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 CLNKQ7Z7G1 428 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 THOC6Q86W42 341 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 DMRTC2Q8IXT2 367 aaPredicted RBP11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 LMNTD2Q8IXW0 634 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 NAT8LQ8N9F0 302 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 APCDD1LQ8NCL9 501 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 C2CD4AQ8NCU7 369 aaPredicted RBP11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 ACTRT1Q8TDG2 376 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 GRK7Q8WTQ7 553 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 TREX2Q9BQ50 279 aaPredicted RBP11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 CCDC77Q9BR77 488 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 AICDAQ9GZX7 198 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 TIMMDC1Q9NPL8 285 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 PPANQ9NQ55 473 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 PRTFDC1Q9NRG1 225 aa11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 TRMT1Q9NXH9 659 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 ZNF223Q9UK11 482 aaPredicted RBP11.13□□□□□ -0.63
TRAFD1-205ENST00000548277 IKZF3Q9UKT9 509 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms