RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 FAM47BQ8NA70 645 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 PAPD5Q8NDF8 572 aaKnown RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 ICA1LQ8NDH6 482 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 SLC37A2Q8TED4 501 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 RSC1A1Q92681 617 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 TM4SF18Q96CE8 201 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 ZBED6CLQ96FA7 236 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 ABCG4Q9H172 646 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 EPB41L1Q9H4G0 881 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 NEUROD4Q9HD90 331 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 ACSS1Q9NUB1 689 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-215ENST00000547672 GIMAP4Q9NUV9 329 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 C2orf42Q9NWW7 574 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 MS4A12Q9NXJ0 267 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 SLC25A37Q9NYZ2 338 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 SUSD2Q9UGT4 822 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 RPS6KA6Q9UK32 745 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 SPACA6W5XKT8 324 aa12.82□□□□□ -0.36
PTCH1-215ENST00000547672 LMO7DNF2Z398 122 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 K7ESF4 209 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 CXCR6O00574 342 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 IFNA14P01570 189 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 IL3P08700 152 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 FAM58BPP0C7Q3 252 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 BMP2P12643 396 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 ATP6V1C1P21283 382 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 HIST1H1TP22492 207 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-215ENST00000547672 UQCRC2P22695 453 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 PTPN6P29350 595 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 PEBP1P30086 187 aaKnown RBP12.81□□□□□ -0.36
PTCH1-215ENST00000547672 TLX1P31314 330 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-215ENST00000547672 ZXDAP98168 799 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 RBBP4Q09028 425 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 TOR1AIP1Q5JTV8 583 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 INTS11Q5TA45 600 aaKnown RBP12.81□□□□□ -0.36
PTCH1-215ENST00000547672 OGFRL1Q5TC84 451 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-215ENST00000547672 CPZQ66K79 652 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 ABHD17CQ6PCB6 329 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 BHLHB9Q6PI77 547 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 ANKRD46Q86W74 232 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 TICAM1Q8IUC6 712 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 NAGSQ8N159 534 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 ZNF548Q8NEK5 533 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-215ENST00000547672 OR10G6Q8NH81 332 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 LMX1AQ8TE12 382 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 FAM162AQ96A26 154 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 MS4A6EQ96DS6 147 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 RNF145Q96MT1 663 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 BTBD9Q96Q07 612 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 ZFYVE21Q9BQ24 234 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 INPP5KQ9BT40 448 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 BDH2Q9BUT1 245 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 LRRC61Q9BV99 259 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 SLC6A16Q9GZN6 736 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 SEMA6CQ9H3T2 930 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 MAGIXQ9H6Y5 334 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 TPT1P8Q9HAU6 139 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 OLAHQ9NV23 265 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 PHF11Q9UIL8 331 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 PNMA8BQ9ULN7 279 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-215ENST00000547672 SAMD4AQ9UPU9 718 aaKnown RBP12.81□□□□□ -0.36
PTCH1-215ENST00000547672 AURKCQ9UQB9 309 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 PLXND1Q9Y4D7 1925 aa12.81□□□□□ -0.36
PTCH1-215ENST00000547672 LAMA3Q16787 3333 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 LRP4O75096 1905 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 A0A0A6YYD5 115 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 C1orf226A1L170 272 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 OR5K3A6NET4 321 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 LILRA5A6NI73 299 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 PDPK1O15530 556 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 AQP9O43315 295 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 ERI3O43414 337 aaKnown RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 CAPNS1P04632 268 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 GSNP06396 782 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 RAP2AP10114 183 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 HOXB9P17482 250 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 ATP5A1P25705 553 aaKnown RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 NTSP30990 170 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 CHI3L1P36222 383 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 PXNP49023 591 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 ERFP50548 548 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 PLA2G16P53816 162 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 ATXN3P54252 364 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 MANFP55145 182 aaKnown RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 OR4D2P58180 307 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 SLAMF1Q13291 335 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 ELOAQ14241 798 aaKnown RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 GRAMD1BQ3KR37 738 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 ZNF542PQ5EBM4 170 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 SWT1Q5T5J6 900 aaKnown RBP12.8□□□□□ -0.36
PTCH1-215ENST00000547672 FBXO42Q6P3S6 717 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 OGFOD3Q6PK18 319 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 ERMP1Q7Z2K6 904 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 WDR5BQ86VZ2 330 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 MSRB3Q8IXL7 192 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 CARFQ8N187 725 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 FBXL6Q8N531 539 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 PACRGLQ8N7B6 248 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 FRMD1Q8N878 549 aa12.8□□□□□ -0.36
PTCH1-215ENST00000547672 BAHD1Q8TBE0 780 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms