RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 B3GNT7Q8NFL0 401 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 ALKBH8Q96BT7 664 aaKnown RBP11.71□□□□□ -0.53
COPS7A-221ENST00000546229 CERS2Q96G23 380 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 PTCHD1Q96NR3 888 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 QRFPRQ96P65 431 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 MCMBPQ9BTE3 642 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 ZFATQ9P243 1243 aa11.71□□□□□ -0.53
COPS7A-221ENST00000546229 MAP1AP78559 2803 aaPredicted RBP11.71□□□□□ -0.54
COPS7A-221ENST00000546229 INTS1Q8N201 2190 aaKnown RBP11.71□□□□□ -0.54
COPS7A-221ENST00000546229 DNHD1Q96M86 4753 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 DNAJC13O75165 2243 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 A0A1B0GTH9 108 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 DNALI1O14645 258 aaPredicted RBP11.7□□□□□ -0.54
COPS7A-221ENST00000546229 HS6ST1O60243 411 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 PRAMEF4O60810 478 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 TOXO94900 526 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 TTC4O95801 387 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 SERPINA6P08185 405 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 RNH1P13489 461 aaKnown RBP11.7□□□□□ -0.54
COPS7A-221ENST00000546229 CAPN3P20807 821 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 MSX1P28360 303 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 HNRNPH1P31943 449 aaKnown RBP11.7□□□□□ -0.54
COPS7A-221ENST00000546229 SLC6A12P48065 614 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 IL2P60568 153 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 RGS1Q08116 209 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 RUNX2Q13950 521 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 ADPRMQ3LIE5 342 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 PRAMEF9Q5VWM5 478 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 NIPAL1Q6NVV3 410 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 NXPE4Q6UWF7 544 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 MEX3BQ6ZN04 569 aaKnown RBP11.7□□□□□ -0.54
COPS7A-221ENST00000546229 CEP97Q8IW35 865 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 LRRC8AQ8IWT6 810 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.7□□□□□ -0.54
COPS7A-221ENST00000546229 SLCO2A1Q92959 643 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 SDCCAG3Q96C92 435 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 PDLIM2Q96JY6 352 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 ZDHHC11Q9H8X9 412 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 TNFRSF10DQ9UBN6 386 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 CORO1CQ9ULV4 474 aaPredicted RBP11.7□□□□□ -0.54
COPS7A-221ENST00000546229 PPT2Q9UMR5 302 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 PPP2R2CQ9Y2T4 447 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 KLF13Q9Y2Y9 288 aaPredicted RBP11.7□□□□□ -0.54
COPS7A-221ENST00000546229 MMACHCQ9Y4U1 282 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 PSAT1Q9Y617 370 aa11.7□□□□□ -0.54
COPS7A-221ENST00000546229 TRBV11-1A0A0K0K1C0 115 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 PGRMC1O00264 195 aaKnown RBP11.69□□□□□ -0.54
COPS7A-221ENST00000546229 CDC7O00311 574 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 PRRG2O14669 202 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 PEX1O43933 1283 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 ITGA10O75578 1167 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 PTGS2P35354 604 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 CDKL1Q00532 357 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 FRG1Q14331 258 aaKnown RBP11.69□□□□□ -0.54
COPS7A-221ENST00000546229 ADNP2Q6IQ32 1131 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 C16orf47Q6ZP98 133 aaPredicted RBP11.69□□□□□ -0.54
COPS7A-221ENST00000546229 SLCO4C1Q6ZQN7 724 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 TMPRSS11BQ86T26 416 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 THOC6Q86W42 341 aaKnown RBP11.69□□□□□ -0.54
COPS7A-221ENST00000546229 CYP4Z2PQ8N1L4 340 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 OR52N2Q8NGI0 321 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 PBKQ96KB5 322 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 PWWP2AQ96N64 755 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 RNF6Q9Y252 685 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 SLC22A14Q9Y267 594 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 TEX264Q9Y6I9 313 aa11.69□□□□□ -0.54
COPS7A-221ENST00000546229 NIPBLQ6KC79 2804 aaeCLIP11.69□□□□□ -0.54
COPS7A-221ENST00000546229 EML6Q6ZMW3 1958 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 ANKHD1Q8IWZ3 2542 aaKnown RBP11.68□□□□□ -0.54
COPS7A-221ENST00000546229 NPEPPSL1A6NEC2 478 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 A8MUA0 341 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 TFECO14948 347 aaPredicted RBP11.68□□□□□ -0.54
COPS7A-221ENST00000546229 ZNF354AO60765 605 aaPredicted RBP11.68□□□□□ -0.54
COPS7A-221ENST00000546229 MYO1DO94832 1006 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 GLSO94925 669 aaPredicted RBP11.68□□□□□ -0.54
COPS7A-221ENST00000546229 GUCA1CO95843 209 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 SERPIND1P05546 499 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 HNF4AP41235 474 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 GPR85P60893 370 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 SKP1P63208 163 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 PDAP1Q13442 181 aaKnown RBP11.68□□□□□ -0.54
COPS7A-221ENST00000546229 CSHL1Q14406 222 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 ZNF460Q14592 562 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 C18orf21Q32NC0 220 aaPredicted RBP11.68□□□□□ -0.54
COPS7A-221ENST00000546229 XKR6Q5GH73 641 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 TOR1AIP1Q5JTV8 583 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 FAM45BPQ6NSW5 357 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 CYP4X1Q8N118 509 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 TRPV3Q8NET8 790 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 LILRB4Q8NHJ6 448 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 FAM45AQ8TCE6 357 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 ANKRD49Q8WVL7 239 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 ATL1Q8WXF7 558 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 NCLNQ969V3 563 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 GAL3ST3Q96A11 431 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 MS4A6EQ96DS6 147 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 CSF3RQ99062 836 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 DEFB126Q9BYW3 111 aa11.68□□□□□ -0.54
COPS7A-221ENST00000546229 ITGB1BP2Q9UKP3 347 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms