RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 PAOXQ6QHF9 649 aa14.39□□□□□ -0.11
CD4-212ENST00000544344 ARSKQ6UWY0 536 aa14.39□□□□□ -0.11
CD4-212ENST00000544344 C4orf22Q6V702 233 aa14.39□□□□□ -0.11
CD4-212ENST00000544344 STRA8Q7Z7C7 330 aa14.39□□□□□ -0.11
CD4-212ENST00000544344 MYRIPQ8NFW9 859 aa14.39□□□□□ -0.11
CD4-212ENST00000544344 OR2M7Q8NG81 312 aa14.39□□□□□ -0.11
CD4-212ENST00000544344 ALKBH8Q96BT7 664 aaKnown RBP14.39□□□□□ -0.11
CD4-212ENST00000544344 SMIM10Q96HG1 83 aa14.39□□□□□ -0.11
CD4-212ENST00000544344 ALPK1Q96QP1 1244 aa14.39□□□□□ -0.11
CD4-212ENST00000544344 SLC6A16Q9GZN6 736 aa14.39□□□□□ -0.11
CD4-212ENST00000544344 CLEC4MQ9H2X3 399 aaPredicted RBP14.39□□□□□ -0.11
CD4-212ENST00000544344 TIMMDC1Q9NPL8 285 aa14.39□□□□□ -0.11
CD4-212ENST00000544344 A0A1B0GVC2 190 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 OR14I1A6ND48 311 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 TGFBR3LH3BV60 316 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 MYO1DO94832 1006 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 PAMP19021 973 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 CCND1P24385 295 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 SLC1A2P43004 574 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 CCR8P51685 355 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 TERF2Q15554 542 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 CATSPEREQ5SY80 951 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 ARMC3Q5W041 872 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 NIPAL1Q6NVV3 410 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 ZNF585AQ6P3V2 769 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 B3GNT6Q6ZMB0 384 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 CAND1Q86VP6 1230 aaKnown RBP14.38□□□□□ -0.11
CD4-212ENST00000544344 OR10Q1Q8NGQ4 319 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 EEF1AKMT1Q8WVE0 214 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 MBD6Q96DN6 1003 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 SMC6Q96SB8 1091 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 TTTY12Q9BZ98 90 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 TSGA10Q9BZW7 698 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 AICDAQ9GZX7 198 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 CLK4Q9HAZ1 481 aaKnown RBP14.38□□□□□ -0.11
CD4-212ENST00000544344 PARVBQ9HBI1 364 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 ZFP69BQ9UJL9 534 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 FBXW2Q9UKT8 454 aa14.38□□□□□ -0.11
CD4-212ENST00000544344 YARS2Q9Y2Z4 477 aaKnown RBP14.38□□□□□ -0.11
CD4-212ENST00000544344 FN1P02751 2386 aaKnown RBP14.38□□□□□ -0.11
CD4-212ENST00000544344 ARHGAP21Q5T5U3 1957 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 BCKDKO14874 412 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 SLC16A5O15375 505 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 HAUS5O94927 633 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 OR6B1O95007 311 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 SERPIND1P05546 499 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 RNH1P13489 461 aaKnown RBP14.37□□□□□ -0.11
CD4-212ENST00000544344 PPP2R1BP30154 601 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 SCTRP47872 440 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 KCNJ1P48048 391 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 SSR4P51571 173 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 RAB8AP61006 207 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 SKP1P63208 163 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 LTBQ06643 244 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 KIF5AQ12840 1032 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 DHX34Q14147 1143 aaKnown RBP14.37□□□□□ -0.11
CD4-212ENST00000544344 TRILQ7L0X0 811 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 ABHD13Q7L211 337 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 CDC20BQ86Y33 519 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 TMEM139Q8IV31 216 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 SCUBE1Q8IWY4 988 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 CA13Q8N1Q1 262 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 ANKRD53Q8N9V6 530 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 OR56A3Q8NH54 315 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 CREB3L4Q8TEY5 395 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 NCLNQ969V3 563 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 ZNF669Q96BR6 464 aaPredicted RBP14.37□□□□□ -0.11
CD4-212ENST00000544344 PYCR2Q96C36 320 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 RMND5BQ96G75 393 aaPredicted RBP14.37□□□□□ -0.11
CD4-212ENST00000544344 VMP1Q96GC9 406 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 SNF8Q96H20 258 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 PDLIM2Q96JY6 352 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 PWWP2AQ96N64 755 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 SMR3AQ99954 134 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 DESI2Q9BSY9 194 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 HAUS8Q9BT25 410 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 AARSD1Q9BTE6 412 aaKnown RBP14.37□□□□□ -0.11
CD4-212ENST00000544344 CCDC68Q9H2F9 335 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 KLHL31Q9H511 634 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 LIN28AQ9H9Z2 209 aaKnown RBP14.37□□□□□ -0.11
CD4-212ENST00000544344 CRIM1Q9NZV1 1036 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 COMMD10Q9Y6G5 202 aa14.37□□□□□ -0.11
CD4-212ENST00000544344 FIGNL2A6NMB9 653 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 G3V3Y1 287 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 OR2J2O76002 312 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 C8GP07360 202 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 CELA3AP09093 270 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 DNASE1P24855 282 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 AHRP35869 848 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 HNF4AP41235 474 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 MAGEA6P43360 314 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 KIR2DL3P43628 341 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 PLGLB1Q02325 96 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 RGS1Q08116 209 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 DHX9Q08211 1270 aaKnown RBP14.36□□□□□ -0.11
CD4-212ENST00000544344 SP140Q13342 867 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 SLC25A35Q3KQZ1 300 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 ANKRD22Q5VYY1 191 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 RGS9BPQ6ZS82 235 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 GPALPP1Q8IXQ4 340 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms