RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 TAF13Q15543 124 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 EXOC3L2Q2M3D2 409 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 NHSL2Q5HYW2 709 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 C22orf42Q6IC83 251 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 SLC8B1Q6J4K2 584 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 TPRG1Q6ZUI0 275 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 SPATC1Q76KD6 591 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 LSMEM2Q8N112 164 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 CHST4Q8NCG5 386 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 TFGQ92734 400 aaPredicted RBP12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 ITFG2Q969R8 447 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 TMEM125Q96AQ2 219 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 APIPQ96GX9 242 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 TSSK6Q9BXA6 273 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 KCNK12Q9HB15 430 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 IL1RAPQ9NPH3 570 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 TUBA8Q9NY65 449 aaPredicted RBP12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 PCDHGB5Q9Y5G0 923 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 A0A1B0GVC2 190 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 A6NIN4 97 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 TRIM64CA6NLI5 447 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 KIAA0513O60268 411 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 ITIH1P19827 911 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 GPX3P22352 226 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 GADD45AP24522 165 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 SSTR4P31391 388 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 RELAQ04206 551 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 LY6G5CQ5SRR4 150 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 IGFN1Q86VF2 1251 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 APCDD1Q8J025 514 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 BPIFB1Q8TDL5 484 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 AHCYL2Q96HN2 611 aaKnown RBP12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 RDH12Q96NR8 316 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 NCKAP1Q9Y2A7 1128 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 SPEF1Q9Y4P9 236 aa12.47□□□□□ -0.41
TUBGCP2-210ENST00000543663 J3QLW9 94 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 LATO43561 262 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 KDELR3O43731 214 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 KDM4BO94953 1096 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 EPOP01588 193 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 ZNF19P17023 458 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 IDSP22304 550 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 TMBIM6P55061 237 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 CAP1Q01518 475 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 UBE2UQ5VVX9 321 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 ZFAND4Q86XD8 727 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 CCDC116Q8IYX3 515 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 OR4C6Q8NH72 309 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 FCGR1BQ92637 280 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 PLD4Q96BZ4 506 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 HDHD5Q9BXW7 423 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 ANKRD60Q9BZ19 345 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 TM9SF3Q9HD45 589 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 DKK3Q9UBP4 350 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 RIIAD1A6NNX1 92 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 AREL1O15033 823 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 MUSKO15146 869 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 RFPL2O75678 378 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 FDXRP22570 491 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 SLC9A3P48764 834 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 ZNF155Q12901 538 aaPredicted RBP12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 GINS1Q14691 196 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 ZMYND11Q15326 602 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 PRAMEF14Q5SWL7 426 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 PRAMEF13Q5VWM6 474 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 PM20D1Q6GTS8 502 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 LARP4Q71RC2 724 aaKnown RBP eCLIP12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 OR9Q2Q8NGE9 314 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 OR51G2Q8NGK0 314 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 OR8K3Q8NH51 312 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 ZNF354BQ96LW1 612 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 GAL3ST4Q96RP7 486 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 SLC22A12Q96S37 553 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 BCL2L14Q9BZR8 327 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 UCK2Q9BZX2 261 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 TMEM27Q9HBJ8 222 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 NEK6Q9HC98 313 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 PHPT1Q9NRX4 125 aaPredicted RBP12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 POFUT2Q9Y2G5 429 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 GPR52Q9Y2T5 361 aa12.46□□□□□ -0.41
TUBGCP2-210ENST00000543663 CACNB4O00305 520 aaPredicted RBP12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 FHP07954 510 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 KCNC4Q03721 635 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 DOC2AQ14183 400 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 LCN8Q6JVE9 175 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 RHEBL1Q8TAI7 183 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 GEMIN6Q8WXD5 167 aaKnown RBP12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 LTB4R2Q9NPC1 389 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 DUS2Q9NX74 493 aaKnown RBP12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 PHF11Q9UIL8 331 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 APC2O95996 2303 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 KRBA1A5PL33 1030 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 MATN4O95460 622 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 CAPNS1P04632 268 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 CD1EP15812 388 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 MYF6P23409 242 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 MAGEA6P43360 314 aa12.46□□□□□ -0.42
TUBGCP2-210ENST00000543663 CRISP3P54108 245 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms