RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 EXT2Q93063 718 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 WDR34Q96EX3 536 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PTCD3Q96EY7 689 aaKnown RBP9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 FAR2Q96K12 515 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ATOH8Q96SQ7 321 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NPLQ9BXD5 320 aaPredicted RBP9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ILKAPQ9H0C8 392 aaPredicted RBP9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RHBGQ9H310 441 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 EPS8L2Q9H6S3 715 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SNX15Q9NRS6 342 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LANCL2Q9NS86 450 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LUZP4Q9P127 313 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 VPS4AQ9UN37 437 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 IKBKGQ9Y6K9 419 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 HIVEP3Q5T1R4 2406 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 GTF3C1Q12789 2109 aa9.17□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ASH1LQ9NR48 2969 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 A0A087WUV0 522 aaPredicted RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 IGHV3-20A0A0C4DH32 117 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MAGEB17A8MXT2 336 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 K7EPI3 171 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PRMT3O60678 531 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PRAMEF4O60810 478 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 B4GALT2O60909 372 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ERLIN1O75477 346 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 KRT38O76015 456 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SEC24DO94855 1032 aaPredicted RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RNH1P13489 461 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 H2AFXP16104 143 aaPredicted RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 JAK1P23458 1154 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ECHS1P30084 290 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SOX11P35716 441 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SERPINB8P50452 374 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SERPINB9P50453 376 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 OLR1P78380 273 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 BTN3A2P78410 334 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 IRF9Q00978 393 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RHAGQ02094 409 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PCDH1Q08174 1060 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CHIT1Q13231 466 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 UBAP2Q5T6F2 1119 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PRAMEF9Q5VWM5 478 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PLAG1Q6DJT9 500 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 KLC3Q6P597 504 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LANCL3Q6ZV70 420 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TAOK1Q7L7X3 1001 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 LRRC70Q7Z2Q7 622 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CUZD1Q86UP6 607 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CENPLQ8N0S6 344 aaPredicted RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CISD2Q8N5K1 135 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 M1APQ8TC57 530 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PPP4R1Q8TF05 950 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 UBTD2Q8WUN7 234 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CCT6BQ92526 530 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 HAS2Q92819 552 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 UBE2E3Q969T4 207 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 GAL3ST3Q96A11 431 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 SNRNP40Q96DI7 357 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MS4A6EQ96DS6 147 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 C19orf60Q96EN9 201 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PTCHD1Q96NR3 888 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 GPR78Q96P69 363 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 WDR77Q9BQA1 342 aaPredicted RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 EFCAB11Q9BUY7 163 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 AICDAQ9GZX7 198 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 VPS11Q9H270 941 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 STMN3Q9NZ72 180 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PTGFRNQ9P2B2 879 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MAP10Q9P2G4 905 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 OPTCQ9UBM4 332 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 NFU1Q9UMS0 254 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 COPG1Q9Y678 874 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 COL12A1Q99715 3063 aa9.16□□□□□ -0.94
TNFRSF1A-214ENST00000543048 EML6Q6ZMW3 1958 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 A0A088AWK7 358 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 DYTNA2CJ06 578 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 A8MUI8 341 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 POC1B-GALNT4F8VUJ3 575 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 PSMD12O00232 456 aaPredicted RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CDC123O75794 336 aaPredicted RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ALDOAP04075 364 aaKnown RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CELA2AP08217 269 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RBP1P09455 135 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ITGAMP11215 1152 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 COL6A2P12110 1019 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 MTHFD2P13995 350 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 EPB42P16452 691 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 EPORP19235 508 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ZNF10P21506 573 aaPredicted RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 CNTFP26441 200 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 HNRNPH1P31943 449 aaKnown RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ALDH18A1P54886 795 aaKnown RBP9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 OR4D2P58180 307 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 ARG2P78540 354 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 BTG2P78543 158 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 TGM3Q08188 693 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 RUNX2Q13950 521 aa9.15□□□□□ -0.94
TNFRSF1A-214ENST00000543048 UBAP2LQ14157 1087 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms