RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 VTI1BQ9UEU0 232 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 ZDHHC2Q9UIJ5 367 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 SLC12A4Q9UP95 1085 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 NAALAD2Q9Y3Q0 740 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 DNAJC15Q9Y5T4 150 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 SPACA6W5XKT8 324 aa11.55□□□□□ -0.56
DDX55-210ENST00000543016 APC2O95996 2303 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 BLACEA4D250 179 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 SYNDIG1LA6NDD5 238 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 ITM2AO43736 263 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 GUCY1B2O75343 617 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 MED26O95402 600 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 STATHP02808 62 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 PCSK2P16519 638 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 IL1RNP18510 177 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 TCN2P20062 427 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 ITGAXP20702 1163 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 HIST1H1TP22492 207 aaPredicted RBP11.54□□□□□ -0.56
DDX55-210ENST00000543016 ARRB2P32121 409 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 SSR2P43308 183 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 GSTM5P46439 218 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 PLA2G16P53816 162 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 FOXA1P55317 472 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 RAB8AP61006 207 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 BTN3A2P78410 334 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 OCRLQ01968 901 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 ABRAXAS2Q15018 415 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 NCF4Q15080 339 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 UGT3A2Q3SY77 523 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 C1orf189Q5VU69 101 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 NUDT13Q86X67 352 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 CRLF3Q8IUI8 442 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 LRRC34Q8IZ02 419 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 METTL4Q8N3J2 472 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 OR9A4Q8NGU2 314 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 TWIST2Q8WVJ9 160 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 NACC2Q96BF6 587 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 MTFMTQ96DP5 389 aaKnown RBP11.54□□□□□ -0.56
DDX55-210ENST00000543016 OR1F2PQ96R84 312 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 KCNA7Q96RP8 456 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 SHCBP1LQ9BZQ2 653 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 CHST8Q9H2A9 424 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 LYRM4Q9HD34 91 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 RIC8BQ9NVN3 520 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 LYARQ9NX58 379 aaKnown RBP11.54□□□□□ -0.56
DDX55-210ENST00000543016 WBP11Q9Y2W2 641 aaKnown RBP11.54□□□□□ -0.56
DDX55-210ENST00000543016 MRPS2Q9Y399 296 aaKnown RBP11.54□□□□□ -0.56
DDX55-210ENST00000543016 PCDHGA6Q9Y5G7 932 aa11.54□□□□□ -0.56
DDX55-210ENST00000543016 SDK2Q58EX2 2172 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 ARHGAP10A1A4S6 786 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 VSTM2BA6NLU5 285 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 PLPP1O14494 284 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 VPS4BO75351 444 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 LYPLA1O75608 230 aaPredicted RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 MYO1DO94832 1006 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 RNH1P13489 461 aaKnown RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 JAK1P23458 1154 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 ATP5A1P25705 553 aaKnown RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 SERPINB3P29508 390 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 OR1D4P47884 311 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 TRA2BP62995 288 aaKnown RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 MC1RQ01726 317 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 ACSM2AQ08AH3 577 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 CLN3Q13286 438 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 DNASE1L3Q13609 305 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 SLC9A5Q14940 896 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 SMU1Q2TAY7 513 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 CRTC2Q53ET0 693 aaPredicted RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 TCHHL1Q5QJ38 904 aaPredicted RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 CES4AQ5XG92 561 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 ACSM2BQ68CK6 577 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 CLEC6AQ6EIG7 209 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 MRPL14Q6P1L8 145 aaKnown RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 GALNT18Q6P9A2 607 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 UBE3DQ7Z6J8 389 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 PDSS2Q86YH6 399 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 ZNF781Q8N8C0 355 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 AMER3Q8N944 861 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 ACOT4Q8N9L9 421 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 KDF1Q8NAX2 398 aaPredicted RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 OR51Q1Q8NH59 317 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 PIWIL2Q8TC59 973 aaKnown RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 CT55Q8WUE5 264 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 CHTF18Q8WVB6 975 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 PPP3R2Q96LZ3 170 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 ACPTQ9BZG2 426 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 C20orf27Q9GZN8 174 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 AICDAQ9GZX7 198 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 CCDC134Q9H6E4 229 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 GPN2Q9H9Y4 310 aaPredicted RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 TNFRSF12AQ9NP84 129 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 PRDM9Q9NQV7 894 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 SLC22A11Q9NSA0 550 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 FARSBQ9NSD9 589 aaKnown RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 TRPC4Q9UBN4 977 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 PHF11Q9UIL8 331 aa11.53□□□□□ -0.56
DDX55-210ENST00000543016 FARSAQ9Y285 508 aaKnown RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 MRPS33Q9Y291 106 aaKnown RBP11.53□□□□□ -0.56
DDX55-210ENST00000543016 TMED5Q9Y3A6 229 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms